Hs03026747_cn

• Gene Symbol: FHOD1
• Assay Reference Genome Location: Chr.16:67234096 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 29109
• Gene Name: formin homology 2 domain containing 1
• Gene Aliases: FHOS
• Location: Chr.16:67229389-67247522 on Build GRCh38
• Assay Gene Location: Within Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FHOD1	NM_001318202.1	15	1797	NP_001305131.1
	NM_013241.2	13	1719	NP_037373.2
	XM_006721180.1	4	372	XP_006721243.1
	XM_011523043.2	15	2013	XP_011521345.1
	XM_011523044.1	15	1742	XP_011521346.1
	XM_011523045.2	15	1507	XP_011521347.1
	AB041046.1	13	1689	BAD06250.1
	AB209584.1	11	2188	BAD92821.1
	AF113615.1	13	1625	AAD39906.1
	AK301157.1	3	430
	AK304232.1	13	1654
	AY192154.1	13	1607	AAO38757.1
	BC033084.1	13	1664	AAH33084.1
	KJ658417.1	15	1685

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	DPEP2 DDX28 FBXL8 ELMO3 NOL3 DUS2 LCAT GFOD2 NRN1L HSF4 SLC12A4 ACD EXOC3L1 CTCF TSNAXIP1 KIAA0895L CARMIL2 ZDHHC1 LOC100131303 LOC105369155 C16orf86 RANBP10 LRRC29 ENKD1 CENPT NUTF2 DPEP3 KCTD19 PARD6A FAM65A TMEM208 ATP6V0D1 TRADD PSKH1 EDC4 SLC9A5 LOC107984813 PSMB10 E2F4 THAP11 TPPP3 LRRC36 HSD11B2 PLEKHG4 CTRL LOC100505942 FHOD1 AGRP MIR328
nsv952044	Chr.16:67141198 - 67244397 on Build GRCh38	Deletion	E2F4 EXOC3L1 C16orf70 KIAA0895L TMEM208 FBXL8 ELMO3 B3GNT9 FHOD1 TRADD NOL3 MIR328 LOC105369155 LRRC29 HSF4
nsv827707	Chr.16:67148355 - 67289296 on Build GRCh38	Loss	E2F4 EXOC3L1 PLEKHG4 C16orf70 KIAA0895L TMEM208 FBXL8 ELMO3 B3GNT9 FHOD1 TRADD NOL3 MIR328 LOC105369155 LRRC29 SLC9A5 HSF4
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	DPEP2 DDX28 FBXL8 ELMO3 NOL3 DUS2 LCAT GFOD2 NRN1L HSF4 SLC12A4 ACD EXOC3L1 CTCF TSNAXIP1 KIAA0895L CARMIL2 ZDHHC1 LOC100131303 LOC105369155 C16orf86 RANBP10 LRRC29 ENKD1 CENPT NUTF2 DPEP3 KCTD19 PARD6A FAM65A TMEM208 ATP6V0D1 B3GNT9 TRADD PSKH1 EDC4 SLC9A5 LOC107984813 PSMB10 E2F4 THAP11 TPPP3 LRRC36 HSD11B2 PLEKHG4 C16orf70 CTRL LOC100505942 FHOD1 AGRP MIR328
nsv471092	Chr.16:67174030 - 67518392 on Build GRCh38	Gain	E2F4 KCTD19 TPPP3 LRRC36 EXOC3L1 HSD11B2 PLEKHG4 KIAA0895L TMEM208 ELMO3 ATP6V0D1 LOC100505942 FHOD1 ZDHHC1 NOL3 AGRP MIR328 LOC105369155 LRRC29 SLC9A5
nsv572905	Chr.16:67181417 - 67282697 on Build GRCh38	Loss	E2F4 FHOD1 EXOC3L1 MIR328 LOC105369155 PLEKHG4 LRRC29 KIAA0895L SLC9A5 TMEM208 ELMO3

More Information

Additional Information:

For this assay, SNP(s) [rs77958237] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of transcription from RNA polymerase II promoter
positive regulation of stress fiber assembly

Function(s)

actin binding
protein binding
identical protein binding