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See other TFPT CNV Assays ›
Gene Symbol
TFPT
Assay Reference Genome
Location

Chr.19:54110167 on build GRCh38
Cytoband
19q13.42
Assay ID Hs03029644_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 29844

Gene Name:

 TCF3 fusion partner

Gene Aliases:

 FB1, INO80F, amida

Location:

 Chr.19:54107013-54115675 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TFPT NM_001321792.1 NP_001308721.1
NM_013342.3 NP_037474.1
XM_005278261.1 XP_005278318.1
AF052052.1 AAD45182.1
AK310627.1
AK310647.1
BC004281.1 AAH04281.1
BC007776.2 AAH07776.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2718853 Chr.19:54109493 - 54110225 on Build GRCh38 Deletion TFPT
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion VSTM1 OSCAR TFPT TARM1 NDUFA3 PRPF31
nsv1056177 Chr.19:54073048 - 54112306 on Build GRCh38 Gain OSCAR TFPT TARM1 NDUFA3
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss TMC4 TFPT CNOT3 NDUFA3 MBOAT7 LENG1 PRPF31
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion TMC4 OSCAR TFPT CNOT3 NDUFA3 TSEN34 MBOAT7 LENG1 PRPF31
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion MIR512-2 MIR4752 ZNF818P OSCAR MIR518A2 TARM1 MIR516B1 MBOAT7 MIR521-2 MIR523 PRKCG CACNG7 ZNF813 MIR517B CACNG8 MIR527 PRPF31 ZNF665 MIR372 MIR526B ZNF765 MIR518F MIR520G VSTM1 MIR515-2 TFPT MIR520H MIR519B MIR519D MIR521-1 MIR1283-1 NDUFA3 MIR515-1 MIR517A MIR518E MIR371B VN1R4 LENG1 LILRB2 MIR498 MIR520A MIR526A1 MIR520F MIR524 VN1R2 MIR526A2 LILRA6 MIR516A1 MIR519A2 MIR525 MIR520D MIR518D ZNF525 NLRP12 MYADM DPRX MIR519C MIR517C LOC105372457 BIRC8 LILRB3 FAM90A27P MIR519A1 LILRB5 MIR373 MIR520C TSEN34 ZNF331 ZNF677 MIR1323 MIR519E MIR935 CACNG6 CNOT3 MIR518A1 MIR522 MIR516B2 MIR512-1 ZNF761 MIR518C TMC4 LOC284379 ZNF845 MIR1283-2 MIR518B MIR520B MIR516A2 TPM3P9 RPS9 MIR371A LILRA5 MIR520E
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss OSCAR TFPT TARM1 NDUFA3 PRPF31
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss VSTM1 MIR935 CACNG6 OSCAR TFPT TARM1 CACNG8 NDUFA3 PRPF31
esv3893246 Chr.19:54081109 - 54111207 on Build GRCh38 Gain OSCAR TFPT TARM1 NDUFA3

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