Hs03194404_cn

• Gene Symbol: ATAD3A
• Assay Reference Genome Location: Chr.1:1527801 on build GRCh38
• Cytoband: 1p36.33

Target Gene Details

• Entrez Gene ID: 55210
• Gene Name: ATPase family, AAA domain containing 3A
• Gene Aliases: -
• Location: Chr.1:1512143-1534687 on Build GRCh38
• Assay Gene Location: Within Exon 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ATAD3A	NM_001170535.1	14	1570	NP_001164006.1
	NM_001170536.1	14	1400	NP_001164007.1
	NM_018188.3	14	1714	NP_060658.3
	AK001571.1	14	1553	BAA91764.1
	AK025865.1	7	570
	AK056099.1	14	1400
	AK091144.1	14	1682	BAC03595.1
	BC007803.2	14	1531	AAH07803.1
	BC011814.2	14	1536	AAH11814.1
	BC014101.2	14	1560	AAH14101.1
	BC033109.1	14	1534	AAH33109.1
	BC063607.1	14	1528	AAH63607.1
	GU189416.1	14	1474

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv545000	Chr.1:1421170 - 1573654 on Build GRCh38	Loss	ATAD3C TMEM240 LOC107985729 SSU72 ANKRD65 ATAD3B VWA1 ATAD3A LOC102724312 TMEM88B
nsv821920	Chr.1:1508588 - 1528446 on Build GRCh38	Gain	ATAD3B ATAD3A
nsv10161	Chr.1:776731 - 1777210 on Build GRCh38	Gain+Loss	B3GALT6 SLC35E2 LOC100287934 NOC2L LINC00115 MXRA8 ATAD3B TNFRSF18 DVL1 MIR6808 LOC100288069 LINC01128 MMP23B TAS1R3 AURKAIP1 MRPL20 MIR6726 LOC100130417 PLEKHN1 MMP23A TTLL10 CCNL2 LOC102724312 CPSF3L LOC148413 SLC35E2B NADK TMEM88B MIR6727 KLHL17 PUSL1 SDF4 ANKRD65 CPTP LOC100288175 AGRN FAM87B FAM41C MIB2 LOC105378948 SAMD11 SCNN1D TMEM240 LOC107985729 ACAP3 FNDC10 CDK11B VWA1 ATAD3A MIR429 CDK11A ATAD3C TNFRSF4 LOC107985728 MIR200B MIR200A UBE2J2 LINC01342 TTLL10-AS1 SSU72 RNF223 ISG15 FAM132A C1orf159 PERM1 HES4 LOC284600
nsv482937	Chr.1:10001 - 2368561 on Build GRCh38	Loss	SLC35E2 LOC100287934 CFAP74 OR4F5 MXRA8 TNFRSF18 FAM138A MTND2P28 LOC105378592 AURKAIP1 MRPL20 MIR6859-1 MIR6726 MTND1P23 DDX11L1 LOC102724312 TMEM52 LOC148413 NADK TMEM88B KLHL17 FAAP20 SDF4 CPTP LOC100288175 FAM87B LOC100132287 TMEM240 PRKCZ LOC100134822 ACAP3 FNDC10 CDK11B MIR1302-2 MORN1 VWA1 ATAD3A MIR429 CDK11A ATAD3C TNFRSF4 LOC102725121 MIR200B UBE2J2 SSU72 C1orf159 PERM1 LOC100133331 B3GALT6 LOC105378591 NOC2L LINC00115 ATAD3B DVL1 MIR6808 LOC100129534 LOC100288069 LINC01128 MMP23B LOC105378947 TAS1R3 LOC100130417 PLEKHN1 MMP23A TTLL10 CCNL2 GNB1 MIR6723 LOC105378589 GABRD CPSF3L SLC35E2B OR4F29 MIR6727 PUSL1 ANKRD65 AGRN LOC107984841 SKI FAM41C MIB2 LOC105378948 SAMD11 WASH7P OR4F16 SCNN1D MIR6859-2 LOC107985729 LOC107985728 MIR200A LINC01342 TTLL10-AS1 RNF223 ISG15 LOC101928626 FAM132A LOC100506504 LOC729737 CALML6 HES4 LOC105378949 LOC284600
nsv950452	Chr.1:1106921 - 1637538 on Build GRCh38	Deletion	B3GALT6 MXRA8 MIB2 ATAD3B TNFRSF18 DVL1 MIR6808 MMP23B SCNN1D TMEM240 TAS1R3 AURKAIP1 MRPL20 LOC107985729 ACAP3 MIR6726 FNDC10 TTLL10 CDK11B CCNL2 VWA1 ATAD3A LOC102724312 MIR429 CPSF3L ATAD3C TNFRSF4 LOC148413 MIR200B MIR200A UBE2J2 LINC01342 TTLL10-AS1 SSU72 FAM132A TMEM88B MIR6727 C1orf159 PUSL1 SDF4 ANKRD65 CPTP
nsv1011818	Chr.1:1394332 - 1575421 on Build GRCh38	Gain	ATAD3C LOC148413 SSU72 ATAD3B TMEM88B TMEM240 MRPL20 LOC107985729 ANKRD65 CCNL2 VWA1 ATAD3A LOC102724312
nsv945744	Chr.1:1496988 - 1530206 on Build GRCh38	Duplication	ATAD3B ATAD3A
nsv482157	Chr.1:1512175 - 1534684 on Build GRCh38	Gain	ATAD3A
esv2758913	Chr.1:1389149 - 2092899 on Build GRCh38	Gain+Loss	SLC35E2 CFAP74 LOC105378591 MIB2 ATAD3B MMP23B TMEM240 PRKCZ MRPL20 LOC107985729 MMP23A FNDC10 CDK11B CCNL2 VWA1 ATAD3A GNB1 LOC102724312 LOC105378589 GABRD CDK11A TMEM52 ATAD3C LOC148413 SLC35E2B SSU72 NADK TMEM88B CALML6 ANKRD65 LOC105378949

More Information

Additional Information:

• Set Membership: Intragenic, Exonic, DGV Variation, Validated

Gene Ontology Categories:

Process(es)

cell growth
negative regulation of apoptotic process

Function(s)

ATP binding