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See other LOC728989 CNV Assays ›
Gene Symbol
LOC728989
Assay Reference Genome
Location

Chr.1:147025008 on build GRCh38
Cytoband
1q21.1
Assay ID Hs03360324_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 728989

Gene Name:

 phosphodiesterase 4D interacting protein pseudogene

Gene Aliases:

 -

Location:

 Chr.1:147019336-147043039 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC728989 NR_024442.2
AK299984.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain LOC101928979 RNVU1-8 GJA8 LOC728989 NBPF11 PDE4DIP FMO5 BCL9 PPIAL4G PDIA3P1 NBPF10 GJA5 LOC100132057 PRKAB2 GPR89B LOC105371226 MIR6077 NOTCH2NL NBPF12 NBPF13P LINC00624 PDZK1P1 LOC101927468 RNVU1-3 RNVU1-6 NUDT4P1 NBPF14 CH17-408M7.1 MIR5087 NUDT4P2 LOC284561 LOC100996517 ACP6 RNVU1-7 LOC100996763 CHD1L RNU1-13P LOC100505824 RNVU1-1 LINC01138 LOC105371242 HYDIN2
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss LOC101928979 ITGA10 GPR89A LOC728989 NBPF11 GNRHR2 PEX11B PDE4DIP PDZK1 FMO5 BCL9 LOC100132057 PRKAB2 GPR89B LOC105371226 NOTCH2NL ANKRD34A RBM8A TXNIP CH17-408M7.1 MIR5087 NUDT4P2 LOC284561 RNVU1-7 LOC100505824 CD160 RNVU1-1 LINC01138 POLR3GL MIR6736 RNVU1-8 LIX1L GJA8 ANKRD35 PIAS3 PPIAL4G PDIA3P1 NBPF10 POLR3C RNF115 GJA5 NUDT17 MIR6077 NBPF12 NBPF13P LINC00624 PDZK1P1 LOC101927468 RNVU1-3 RNVU1-6 NUDT4P1 NBPF14 HFE2 LOC100996517 ACP6 LOC100996763 CHD1L RNU1-13P LOC105371242 HYDIN2
nsv1121713 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion FMO5 PDIA3P1 RNVU1-8 NBPF13P PRKAB2 CHD1L LOC728989
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss RNVU1-8 GJA8 LOC728989 NBPF11 PDE4DIP FMO5 BCL9 PPIAL4G PDIA3P1 NBPF10 GJA5 LOC100132057 PRKAB2 GPR89B LOC105371226 MIR6077 NOTCH2NL NBPF12 NBPF13P LINC00624 PDZK1P1 LOC101927468 RNVU1-3 NUDT4P1 NBPF14 CH17-408M7.1 MIR5087 NUDT4P2 LOC284561 LOC100996517 ACP6 RNVU1-7 LOC100996763 CHD1L RNU1-13P LOC100505824 RNVU1-1 LINC01138 LOC105371242 HYDIN2
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion POLR3GL LOC101928979 RNVU1-8 LIX1L GJA8 LOC728989 NBPF11 PDE4DIP FMO5 BCL9 PPIAL4G PDIA3P1 NBPF10 GJA5 LOC100132057 PRKAB2 GPR89B LOC105371226 MIR6077 NOTCH2NL ANKRD34A NBPF12 TXNIP NBPF13P LINC00624 PDZK1P1 LOC101927468 RNVU1-3 RNVU1-6 NUDT4P1 NBPF14 CH17-408M7.1 MIR5087 NUDT4P2 LOC284561 HFE2 LOC100996517 ACP6 RNVU1-7 LOC100996763 CHD1L RNU1-13P LOC100505824 RNVU1-1 LINC01138 LOC105371242 HYDIN2
nsv946295 Chr.1:146987843 - 147036027 on Build GRCh38 Duplication NBPF12 LOC728989
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication RNVU1-8 GJA8 LOC728989 NBPF11 PDE4DIP FMO5 BCL9 PPIAL4G PDIA3P1 GJA5 LOC100132057 PRKAB2 GPR89B LOC105371226 MIR6077 NOTCH2NL NBPF12 NBPF13P LINC00624 PDZK1P1 LOC101927468 RNVU1-3 NUDT4P1 NBPF14 CH17-408M7.1 MIR5087 NUDT4P2 LOC284561 LOC100996517 ACP6 RNVU1-7 LOC100996763 CHD1L RNU1-13P LOC100505824 RNVU1-1 LINC01138 LOC105371242 HYDIN2
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain LOC101928979 RNVU1-8 GJA8 LOC728989 NBPF11 PDE4DIP FMO5 BCL9 PPIAL4G PDIA3P1 NBPF10 GJA5 LOC100132057 PRKAB2 GPR89B LOC105371226 MIR6077 NOTCH2NL NBPF12 NBPF13P LINC00624 PDZK1P1 LOC101927468 RNVU1-3 RNVU1-6 NUDT4P1 NBPF14 CH17-408M7.1 MIR5087 NUDT4P2 LOC284561 LOC100996517 ACP6 RNVU1-7 LOC100996763 CHD1L RNU1-13P LOC100505824 RNVU1-1 LINC01138 LOC105371242 HYDIN2
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion LOC101928979 NBPF9 RNVU1-8 GJA8 LOC728989 NBPF11 PDE4DIP FMO5 BCL9 PPIAL4G PDIA3P1 NBPF10 GJA5 LOC100132057 PRKAB2 GPR89B LOC105371226 MIR6077 NOTCH2NL NBPF12 NBPF13P LINC00624 PDZK1P1 LOC101927468 RNVU1-3 NUDT4P1 NBPF14 CH17-408M7.1 MIR5087 NUDT4P2 LOC284561 LOC100996517 ACP6 RNVU1-7 LOC100996763 CHD1L RNU1-13P LOC100505824 RNVU1-1 LINC01138 LOC105371242 HYDIN2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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