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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1294741 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03368828_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 20 - Intron 21
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_005244717.3 XP_005244774.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC004874.2 AAH04874.2
BC021851.1 AAH21851.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss SCNN1D MIR6726 ACAP3 UBE2J2
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss SCNN1D PLEKHN1 MMP23A LOC100133331 ATAD3B PERM1 OR4F16 MIR200A UBE2J2 MIB2 MORN1 OR4F5 LOC100132287 LOC100506504 GNB1 SLC35E2B LOC105378948 DDX11L1 MMP23B CFAP74 LOC100134822 LOC100287934 SSU72 VWA1 MIR6859-2 ATAD3C NOC2L MTND2P28 ACAP3 PUSL1 WASH7P LOC105378591 MIR6727 SKI LOC148413 LOC105378592 NADK MIR6808 LINC01128 AGRN LOC100130417 FAM132A MIR200B TNFRSF18 LOC284600 KLHL17 CPTP CCNL2 SLC35E2 LOC107985728 MIR429 LOC105378949 LOC107984841 TMEM52 TNFRSF4 FAM41C GABRD MTND1P23 MXRA8 DVL1 FAAP20 HES4 LOC102724312 MIR6723 LINC01342 ANKRD65 CDK11A LOC100288175 RNF223 SDF4 LOC101928626 MRPL20 LINC00115 CDK11B B3GALT6 TMEM88B FAM138A LOC102725121 C1orf159 FNDC10 CPSF3L LOC100129534 MIR6726 TTLL10 MIR1302-2 LOC105378589 LOC105378947 MIR6859-1 ATAD3A ISG15 LOC100288069 TMEM240 FAM87B OR4F29 TAS1R3 PRKCZ AURKAIP1 LOC107985729 SAMD11 CALML6 LOC729737 TTLL10-AS1
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss SCNN1D MIR6726 ACAP3 B3GALT6 FAM132A SDF4 UBE2J2
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss MIR6808 MIR6726 TAS1R3 ACAP3 PUSL1 DVL1 CPTP MIR6727 CPSF3L
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss SCNN1D MIR6726 ACAP3
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss SCNN1D MIR6726 TTLL10 RNF223 TNFRSF18 SDF4 MIR200A UBE2J2 MIR429 ACAP3 TTLL10-AS1 B3GALT6 FAM132A TNFRSF4 C1orf159 MIR200B LINC01342
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication SCNN1D MIR6726 TTLL10 MIR200A UBE2J2 AGRN FAM132A MIR200B LINC01342 LOC105378948 LOC100288175 RNF223 TNFRSF18 TAS1R3 CPTP SDF4 MIR429 ACAP3 PUSL1 TTLL10-AS1 B3GALT6 TNFRSF4 C1orf159 MIR6727 CPSF3L
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion SCNN1D MIR6808 MIR6726 MXRA8 TAS1R3 ACAP3 PUSL1 DVL1 CPTP AURKAIP1 MIR6727 CPSF3L
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss SCNN1D PLEKHN1 MMP23A MXRA8 DVL1 ATAD3B PERM1 MIR200A UBE2J2 MIB2 HES4 LOC102724312 LINC01342 ANKRD65 SLC35E2B CDK11A LOC105378948 LOC100288175 RNF223 MMP23B SDF4 LOC100287934 SSU72 VWA1 MRPL20 ATAD3C NOC2L LINC00115 ACAP3 PUSL1 CDK11B B3GALT6 TMEM88B C1orf159 FNDC10 MIR6727 CPSF3L MIR6726 TTLL10 LOC148413 NADK MIR6808 ATAD3A LINC01128 AGRN LOC100130417 FAM132A ISG15 MIR200B LOC100288069 TMEM240 FAM87B TNFRSF18 LOC284600 TAS1R3 KLHL17 CPTP CCNL2 SLC35E2 AURKAIP1 LOC107985728 LOC107985729 SAMD11 MIR429 TTLL10-AS1 TNFRSF4 FAM41C
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion SCNN1D MIR6726 MXRA8 TTLL10 DVL1 ATAD3B LOC148413 MIR200A UBE2J2 MIB2 MIR6808 ATAD3A FAM132A LOC102724312 MIR200B LINC01342 ANKRD65 TMEM240 MMP23B TNFRSF18 TAS1R3 CPTP CCNL2 SDF4 AURKAIP1 LOC107985729 SSU72 VWA1 MRPL20 ATAD3C MIR429 ACAP3 PUSL1 TTLL10-AS1 CDK11B B3GALT6 TMEM88B TNFRSF4 C1orf159 FNDC10 MIR6727 CPSF3L
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain SCNN1D MIR6808 MIR6726 MXRA8 TAS1R3 ACAP3 PUSL1 DVL1 CPTP MIR6727 CPSF3L
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss SCNN1D MIR6726 MXRA8 TAS1R3 DVL1 CPTP AURKAIP1 UBE2J2 MIR6808 ACAP3 PUSL1 MIR6727 CPSF3L
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain SCNN1D PLEKHN1 MIR6726 MXRA8 TTLL10 DVL1 PERM1 LOC148413 MIR200A UBE2J2 HES4 MIR6808 AGRN LOC100130417 FAM132A ISG15 MIR200B LINC01342 ANKRD65 LOC105378948 LOC100288175 RNF223 TNFRSF18 LOC284600 TAS1R3 KLHL17 CPTP CCNL2 SDF4 AURKAIP1 LOC107985728 SAMD11 MRPL20 MIR429 NOC2L ACAP3 PUSL1 TTLL10-AS1 B3GALT6 TMEM88B TNFRSF4 C1orf159 MIR6727 CPSF3L
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain SCNN1D MIR6726 TTLL10 TNFRSF18 SDF4 MIR200A UBE2J2 MIR429 ACAP3 PUSL1 TTLL10-AS1 B3GALT6 FAM132A TNFRSF4 MIR200B MIR6727 CPSF3L

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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