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See other TTLL10 CNV Assays ›
Gene Symbol
TTLL10
Assay Reference Genome
Location

Chr.1:1183523 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03370917_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 254173

Gene Name:

 tubulin tyrosine ligase like 10

Gene Aliases:

 TTLL5

Location:

 Chr.1:1173709-1197936 on Build GRCh38

Assay Gene Location:

 Within Intron 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TTLL10 NM_001130045.1 NP_001123517.1
NM_153254.2 NP_694986.2
XM_005244738.1 XP_005244795.1
XM_011541177.2 XP_011539479.1
XM_017000906.1 XP_016856395.1
XM_017000907.1 XP_016856396.1
XM_017000908.1 XP_016856397.1
XM_017000909.1 XP_016856398.1
XM_017000910.1 XP_016856399.1
XM_017000911.1 XP_016856400.1
XM_017000912.1 XP_016856401.1
AK093438.1 BAC04164.1
AK124125.1 BAC85781.1
BC126152.1
BC126154.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss GABRD LOC102725121 LOC101928626 LOC107985728 MORN1 VWA1 LOC100288175 OR4F29 MIR1302-2 ANKRD65 MMP23B MIR200B CPTP TTLL10 SSU72 LOC100287934 PERM1 MIR6723 PRKCZ B3GALT6 MTND2P28 LOC100133331 ACAP3 NADK LOC100506504 UBE2J2 LOC100130417 ATAD3C FAM41C CFAP74 SLC35E2B SCNN1D CPSF3L TNFRSF18 LOC100288069 LOC105378589 HES4 DDX11L1 DVL1 TNFRSF4 PLEKHN1 LOC107984841 LOC107985729 LOC729737 OR4F16 OR4F5 MIB2 LINC00115 LOC100132287 AURKAIP1 CCNL2 LOC100129534 TMEM52 ISG15 LOC100134822 MIR6808 TMEM240 LOC105378591 C1orf159 RNF223 FAM138A MIR6726 MIR6859-2 GNB1 LINC01128 MIR6727 CDK11A FAAP20 LOC105378592 TAS1R3 TMEM88B SKI KLHL17 LOC284600 ATAD3B LOC105378949 MIR200A LOC105378948 AGRN LINC01342 SAMD11 MTND1P23 PUSL1 TTLL10-AS1 MIR6859-1 FAM87B SLC35E2 NOC2L ATAD3A FAM132A SDF4 MRPL20 LOC102724312 CALML6 LOC105378947 MMP23A MXRA8 WASH7P FNDC10 MIR429 LOC148413 CDK11B
nsv544954 Chr.1:1139244 - 1186414 on Build GRCh38 Loss TTLL10 MIR429 TTLL10-AS1 LINC01342 MIR200B MIR200A
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain UBE2J2 TTLL10 FAM132A LOC105378948 SDF4 SCNN1D C1orf159 RNF223 LINC01342 TNFRSF18 B3GALT6 TNFRSF4 MIR429 TTLL10-AS1 MIR200B MIR200A
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss UBE2J2 TTLL10 FAM132A SDF4 SCNN1D C1orf159 RNF223 LINC01342 MIR6726 TNFRSF18 B3GALT6 TNFRSF4 MIR429 TTLL10-AS1 ACAP3 MIR200B MIR200A
nsv544956 Chr.1:1171093 - 1241217 on Build GRCh38 Loss TTLL10 B3GALT6 TNFRSF4 SDF4 TTLL10-AS1 TNFRSF18
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LOC100130417 LOC107985728 LOC105378948 FAM41C C1orf159 RNF223 AGRN LINC01342 LOC100288175 TNFRSF18 HES4 SAMD11 TNFRSF4 PLEKHN1 TTLL10-AS1 NOC2L MIR200B TTLL10 SDF4 PERM1 KLHL17 LOC284600 MIR429 ISG15 MIR200A
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication UBE2J2 LOC105378948 SCNN1D C1orf159 RNF223 AGRN CPSF3L LINC01342 LOC100288175 MIR6726 TNFRSF18 TNFRSF4 PUSL1 TTLL10-AS1 MIR6727 MIR200B CPTP TTLL10 FAM132A SDF4 TAS1R3 B3GALT6 MIR429 ACAP3 MIR200A
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC107985728 TMEM240 C1orf159 RNF223 VWA1 LOC100288175 MIR6726 ANKRD65 LINC01128 MMP23B MIR6727 CDK11A MIR200B CPTP TTLL10 SSU72 LOC100287934 TAS1R3 PERM1 TMEM88B KLHL17 B3GALT6 LOC284600 ATAD3B ACAP3 NADK MIR200A UBE2J2 LOC100130417 ATAD3C LOC105378948 FAM41C SLC35E2B SCNN1D AGRN CPSF3L LINC01342 TNFRSF18 LOC100288069 HES4 SAMD11 DVL1 TNFRSF4 PLEKHN1 PUSL1 TTLL10-AS1 FAM87B SLC35E2 NOC2L ATAD3A FAM132A LOC107985729 SDF4 MRPL20 LOC102724312 MMP23A MXRA8 MIB2 FNDC10 LINC00115 MIR429 AURKAIP1 CCNL2 LOC148413 ISG15 CDK11B MIR6808
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss UBE2J2 LOC100130417 LOC107985728 LOC105378948 FAM41C C1orf159 RNF223 AGRN LINC01342 LOC100288175 TNFRSF18 HES4 SAMD11 TNFRSF4 PLEKHN1 LINC01128 TTLL10-AS1 FAM87B NOC2L MIR200B TTLL10 FAM132A SDF4 PERM1 KLHL17 LINC00115 B3GALT6 LOC284600 MIR429 ISG15 MIR200A
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion UBE2J2 ATAD3C TMEM240 SCNN1D C1orf159 VWA1 CPSF3L LINC01342 MIR6726 TNFRSF18 DVL1 TNFRSF4 ANKRD65 MMP23B PUSL1 TTLL10-AS1 MIR6727 MIR200B ATAD3A CPTP TTLL10 SSU72 FAM132A LOC107985729 SDF4 MRPL20 LOC102724312 TAS1R3 TMEM88B MXRA8 MIB2 FNDC10 B3GALT6 ATAD3B MIR429 AURKAIP1 CCNL2 LOC148413 ACAP3 CDK11B MIR200A MIR6808
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain UBE2J2 LOC100130417 LOC107985728 LOC105378948 SCNN1D C1orf159 RNF223 AGRN CPSF3L LINC01342 LOC100288175 MIR6726 TNFRSF18 HES4 SAMD11 DVL1 TNFRSF4 PLEKHN1 ANKRD65 PUSL1 TTLL10-AS1 MIR6727 NOC2L MIR200B CPTP TTLL10 FAM132A SDF4 MRPL20 TAS1R3 PERM1 TMEM88B MXRA8 KLHL17 B3GALT6 LOC284600 MIR429 AURKAIP1 CCNL2 LOC148413 ISG15 ACAP3 MIR200A MIR6808
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion TTLL10 LOC105378948 SDF4 C1orf159 RNF223 PERM1 AGRN LINC01342 LOC100288175 TNFRSF18 KLHL17 HES4 SAMD11 TNFRSF4 MIR429 PLEKHN1 TTLL10-AS1 ISG15 NOC2L MIR200B MIR200A
nsv509257 Chr.1:1151955 - 1189470 on Build GRCh38 Insertion TTLL10 MIR429 TTLL10-AS1 MIR200B MIR200A
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain UBE2J2 TTLL10 FAM132A SDF4 SCNN1D CPSF3L MIR6726 TNFRSF18 B3GALT6 TNFRSF4 MIR429 PUSL1 TTLL10-AS1 MIR6727 ACAP3 MIR200B MIR200A

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More Information


Additional Information:

For this assay, SNP(s) [rs77560046] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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