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See other PPP1R2 CNV Assays ›
Gene Symbol
PPP1R2
Assay Reference Genome
Location

Chr.3:195536862 on build GRCh38
Cytoband
3q29
Assay ID Hs03492955_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5504

Gene Name:

 protein phosphatase 1 regulatory inhibitor subunit 2

Gene Aliases:

 IPP-2, IPP2

Location:

 Chr.3:195514422-195543401 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPP1R2 NM_001291504.1 NP_001278433.1
NM_001291505.1 NP_001278434.1
NM_001316325.1 NP_001303254.1
NM_006241.7 NP_006232.1
NR_133014.1
XM_006713682.3 XP_006713745.1
AJ133812.1 CAB41680.1
AY063767.1 AAL48322.1
BC007655.2 AAH07655.1
BC066921.1 AAH66921.1
BI549862.1
BI560631.1
X78873.1 CAA55475.1
Z29646.1 CAA82754.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1001387 Chr.3:195465410 - 195934667 on Build GRCh38 Gain LOC101929697 SDHAP2 MIR570 TNK2 LOC105374297 MUC20 LINC00969 APOD LOC105374299 MUC4 MIR6829 PPP1R2
dgv5015n100 Chr.3:195532487 - 195751823 on Build GRCh38 Loss SDHAP2 MIR570 LOC105374297 MUC20 LINC00969 APOD MUC4 PPP1R2
nsv1006229 Chr.3:195350692 - 195747880 on Build GRCh38 Gain SDHAP2 MIR570 LOC105374297 MUC20 LINC00969 APOD MUC4 ACAP2 PPP1R2
nsv829824 Chr.3:195410338 - 195559855 on Build GRCh38 Loss ACAP2 PPP1R2
nsv428430 Chr.3:195478549 - 196102555 on Build GRCh38 Gain+Loss LOC101929697 SDHAP2 MIR570 LOC105374297 APOD LOC105374299 MIR6829 TFRC SDHAP1 PPP1R2 TNK2 MUC20 LINC00969 MUC4 LOC105374301
esv2763776 Chr.3:195514028 - 195775248 on Build GRCh38 Gain+Loss SDHAP2 MIR570 LOC105374297 MUC20 LINC00969 APOD MUC4 PPP1R2
dgv5014n100 Chr.3:195514016 - 195747880 on Build GRCh38 Gain SDHAP2 MIR570 LOC105374297 MUC20 LINC00969 APOD MUC4 PPP1R2
esv2759213 Chr.3:195382058 - 196344722 on Build GRCh38 Gain+Loss LOC101929697 SDHAP2 MIR570 PCYT1A LOC105374297 APOD LOC105374299 MIR6829 ACAP2 TFRC TM4SF19-TCTEX1D2 SDHAP1 SLC51A PPP1R2 TNK2 TM4SF19-AS1 MUC20 LINC00969 ZDHHC19 TCTEX1D2 MUC4 TM4SF19 LOC105374301 LINC00885

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More Information


Additional Information:

For this assay, SNP(s) [rs114880369] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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