Hs03578840_cn

• Gene Symbol: STK19
• Assay Reference Genome Location: Chr.6:31974891 on build GRCh38
• Cytoband: 6p21.33

Target Gene Details

• Entrez Gene ID: 8859
• Gene Name: serine/threonine kinase 19
• Gene Aliases: D6S60, D6S60E, G11, HLA-RP1, RP1
• Location: Chr.6:31971175-31981446 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
STK19	NM_004197.1			NP_004188.1
	NM_032454.1			NP_115830.1
	NR_026717.1
	AK302111.1
	AK307198.1
	BC110347.1			AAI10348.1
	BC121128.1
	BC121129.1
	BC143833.1
	L26260.1			AAA20122.1
	X77386.1			CAA54565.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv601970	Chr.6:31970674 - 31980252 on Build GRCh38	Loss	STK19 DXO
dgv10463n54	Chr.6:31817661 - 32683279 on Build GRCh38	Loss	STK19 SKIV2L C6orf10 PPT2-EGFL8 HLA-DRB5 MIR1236 LOC100507547 SLC44A4 C4A PBX2 AGPAT1 ATF6B C2-AS1 MIR6721 LOC101929163 HLA-DRB6 GPSM3 HLA-DRB1 TNXA C2 NOTCH4 AGER C4B HSPA1B MIR6833 HLA-DQA1 HCG23 SNORD52 BTNL2 CFB HLA-DRA C6orf48 NEU1 PPT2 HLA-DQB1 NELFE ZBTB12 FKBPL EHMT2 DXO PRRT1 HSPA1A RNF5 HLA-DQB1-AS1 CYP21A2 CYP21A1P TNXB SNORD48 EGFL8
nsv601971	Chr.6:31971488 - 32046679 on Build GRCh38	Gain	TNXA C4B CYP21A2 STK19 C4A CYP21A1P DXO TNXB
nsv428141	Chr.6:31903735 - 32125066 on Build GRCh38	Gain+Loss	C4B STK19 SKIV2L DXO CFB MIR1236 TNXA CYP21A2 C2 C4A CYP21A1P ATF6B NELFE TNXB C2-AS1
nsv1126749	Chr.6:31457323 - 32594423 on Build GRCh38	Deletion	STK19 SAPCD1-AS1 SKIV2L SNORA38 C6orf10 BAG6 DDX39B TNF PPT2-EGFL8 HLA-DRB5 MIR1236 LOC100507547 SLC44A4 C4A PBX2 AGPAT1 NCR3 GPANK1 AIF1 ATF6B VARS ATP6V1G2 C2-AS1 MIR6721 SNORD117 LOC101929163 LTB NFKBIL1 MCCD1 ATP6V1G2-DDX39B HLA-DRB6 GPSM3 MIR6832 HLA-DRB1 DDAH2 TNXA C2 MSH5 LST1 C6orf25 LOC102725068 NOTCH4 APOM AGER LSM2 C4B HSPA1B MIR6833 HCG23 SNORD52 HSPA1L BTNL2 CFB LY6G6E VWA7 HCG26 HLA-DRA C6orf48 NEU1 MIR4646 PPT2 C6orf47 LY6G6D LY6G6F LTA PRRC2A SNORD84 NELFE ZBTB12 LOC100287329 CLIC1 FKBPL EHMT2 LY6G5B DXO PRRT1 MSH5-SAPCD1 HSPA1A ABHD16A SAPCD1 CSNK2B RNF5 DDX39B-AS1 CYP21A2 LY6G6C CYP21A1P HCP5 LY6G5C TNXB MICB SNORD48 EGFL8
dgv10403n54	Chr.6:31312324 - 32049763 on Build GRCh38	Loss	STK19 SAPCD1-AS1 SKIV2L SNORA38 BAG6 DDX39B TNF MIR1236 SLC44A4 MICA C4A NCR3 GPANK1 AIF1 VARS ATP6V1G2 C2-AS1 SNORD117 LTB NFKBIL1 MCCD1 ATP6V1G2-DDX39B MIR6832 DDAH2 TNXA C2 MSH5 LST1 C6orf25 LOC102725068 APOM LSM2 C4B HSPA1B SNORD52 HSPA1L CFB LY6G6E VWA7 HCG26 C6orf48 NEU1 MIR4646 C6orf47 LY6G6D LY6G6F LTA PRRC2A SNORD84 NELFE ZBTB12 LOC100287329 HLA-B CLIC1 EHMT2 LY6G5B DXO MSH5-SAPCD1 HSPA1A ABHD16A SAPCD1 CSNK2B DDX39B-AS1 CYP21A2 LY6G6C CYP21A1P HCP5 MIR6891 LY6G5C TNXB MICB SNORD48
nsv1073969	Chr.6:31456422 - 33480523 on Build GRCh38	Deletion	TAPBP STK19 SLC39A7 SKIV2L SNORA38 PSMB8 C6orf10 DDX39B HLA-DPB2 TNF MIR1236 PBX2 NCR3 RXRB HLA-DOA GPANK1 C2-AS1 MIR6721 LOC101929163 LTB NFKBIL1 ATP6V1G2-DDX39B HLA-DOB HLA-DRB6 GPSM3 MIR6832 HLA-DRB1 DDAH2 HLA-DMA C2 MSH5 C6orf25 LOC102725068 HLA-DPB1 PFDN6 ZBTB9 HLA-DQB2 C4B COL11A2 MIR6833 BRD2 SNORD52 HSPA1L HCG24 LY6G6E B3GALT4 C6orf47 LY6G6D LY6G6F LTA PRRC2A HLA-DQB1 RGL2 FKBPL LY6G5B PSMB9 ABHD16A CSNK2B RNF5 HLA-DQB1-AS1 CYP21A1P HCP5 SYNGAP1 LY6G5C MICB SAPCD1-AS1 MIR6834 BAG6 HCG25 PPT2-EGFL8 HLA-DRB5 TAP2 LOC100507547 SLC44A4 C4A AGPAT1 MIR219A1 AIF1 ATF6B VARS ATP6V1G2 WDR46 SNORD117 MCCD1 PHF1 TNXA HLA-DQA2 LST1 PSMB8-AS1 NOTCH4 MIR3135B HLA-DMB APOM CUTA AGER RPS18 TAP1 LSM2 HSPA1B RING1 HLA-DQA1 ZBTB22 HCG23 BTNL2 CFB VWA7 HCG26 HLA-DPA1 HLA-DRA C6orf48 MIR5004 NEU1 MIR4646 PPT2 SNORD84 NELFE ZBTB12 LOC100287329 VPS52 CLIC1 LOC100294145 EHMT2 DAXX MIR6873 DXO PRRT1 MSH5-SAPCD1 HSPA1A SAPCD1 KIFC1 DDX39B-AS1 CYP21A2 LY6G6C HSD17B8 TNXB PPP1R2P1 SNORD48 EGFL8
nsv1112900	Chr.6:31455323 - 33480423 on Build GRCh38	Deletion	TAPBP STK19 SLC39A7 SKIV2L SNORA38 PSMB8 C6orf10 DDX39B HLA-DPB2 TNF MIR1236 PBX2 NCR3 RXRB HLA-DOA GPANK1 C2-AS1 MIR6721 LOC101929163 LTB NFKBIL1 ATP6V1G2-DDX39B HLA-DOB HLA-DRB6 GPSM3 MIR6832 HLA-DRB1 DDAH2 HLA-DMA C2 MSH5 C6orf25 LOC102725068 HLA-DPB1 PFDN6 ZBTB9 HLA-DQB2 C4B COL11A2 MIR6833 BRD2 SNORD52 HSPA1L HCG24 LY6G6E B3GALT4 C6orf47 LY6G6D LY6G6F LTA PRRC2A HLA-DQB1 RGL2 FKBPL LY6G5B PSMB9 ABHD16A CSNK2B RNF5 HLA-DQB1-AS1 CYP21A1P HCP5 SYNGAP1 LY6G5C MICB SAPCD1-AS1 MIR6834 BAG6 HCG25 PPT2-EGFL8 HLA-DRB5 TAP2 LOC100507547 SLC44A4 C4A AGPAT1 MIR219A1 AIF1 ATF6B VARS ATP6V1G2 WDR46 SNORD117 MCCD1 PHF1 TNXA HLA-DQA2 LST1 PSMB8-AS1 NOTCH4 MIR3135B HLA-DMB APOM CUTA AGER RPS18 TAP1 LSM2 HSPA1B RING1 HLA-DQA1 ZBTB22 HCG23 BTNL2 CFB VWA7 HCG26 HLA-DPA1 HLA-DRA C6orf48 MIR5004 NEU1 MIR4646 PPT2 SNORD84 NELFE ZBTB12 LOC100287329 VPS52 CLIC1 LOC100294145 EHMT2 DAXX MIR6873 DXO PRRT1 MSH5-SAPCD1 HSPA1A SAPCD1 KIFC1 DDX39B-AS1 CYP21A2 LY6G6C HSD17B8 TNXB PPP1R2P1 SNORD48 EGFL8
nsv830628	Chr.6:31919777 - 31979823 on Build GRCh38	Loss	STK19 C2 SKIV2L DXO NELFE CFB C2-AS1 MIR1236
dgv10404n54	Chr.6:31312550 - 32516591 on Build GRCh38	Loss	STK19 SAPCD1-AS1 SKIV2L SNORA38 C6orf10 BAG6 DDX39B TNF PPT2-EGFL8 MIR1236 LOC100507547 SLC44A4 MICA C4A PBX2 AGPAT1 NCR3 GPANK1 AIF1 ATF6B VARS ATP6V1G2 C2-AS1 MIR6721 SNORD117 LOC101929163 LTB NFKBIL1 MCCD1 ATP6V1G2-DDX39B GPSM3 MIR6832 DDAH2 TNXA C2 MSH5 LST1 C6orf25 LOC102725068 NOTCH4 APOM AGER LSM2 C4B HSPA1B MIR6833 HCG23 SNORD52 HSPA1L BTNL2 CFB LY6G6E VWA7 HCG26 HLA-DRA C6orf48 NEU1 MIR4646 PPT2 C6orf47 LY6G6D LY6G6F LTA PRRC2A SNORD84 NELFE ZBTB12 LOC100287329 HLA-B CLIC1 FKBPL EHMT2 LY6G5B DXO PRRT1 MSH5-SAPCD1 HSPA1A ABHD16A SAPCD1 CSNK2B RNF5 DDX39B-AS1 CYP21A2 LY6G6C CYP21A1P HCP5 MIR6891 LY6G5C TNXB MICB SNORD48 EGFL8
nsv284	Chr.6:31957962 - 32028944 on Build GRCh38	Deletion	TNXA C4B STK19 C4A SKIV2L CYP21A1P DXO NELFE

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase

Gene Ontology Categories:

Process(es)

protein phosphorylation

Function(s)

protein serine/threonine kinase activity
ATP binding