Hs03625489_cn

• Gene Symbol: STYXL1
• Assay Reference Genome Location: Chr.7:76033798 on build GRCh38
• Cytoband: 7q11.23

Target Gene Details

• Entrez Gene ID: 51657
• Gene Name: serine/threonine/tyrosine interacting-like 1
• Gene Aliases: DUSP24, MK-STYX, MKSTYX
• Location: Chr.7:75995820-76048709 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
STYXL1	NM_001317785.1			NP_001304714.1
	NM_001317786.1			NP_001304715.1
	NM_001317787.1			NP_001304716.1
	NM_001317788.1			NP_001304717.1
	NM_016086.2			NP_057170.1
	NR_134486.1
	XM_011516292.2			XP_011514594.1
	XM_011516293.2			XP_011514595.1
	XM_011516300.1			XP_011514602.1
	XM_017012296.1			XP_016867785.1
	XM_017012297.1			XP_016867786.1
	XM_017012298.1			XP_016867787.1
	XM_017012299.1			XP_016867788.1
	XM_017012300.1			XP_016867789.1
	XM_017012301.1			XP_016867790.1
	XM_017012302.1			XP_016867791.1
	AF069762.1			AAD36983.1
	AK308828.1
	AK308912.1
	AL533027.3
	BC024035.2			AAH24035.1
	BI772699.1
	BM126964.1
	BM824947.1
	BU859937.1
	BX537896.1			CAD97887.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv821252	Chr.7:76033649 - 76039546 on Build GRCh38	Deletion	STYXL1
nsv428173	Chr.7:75934531 - 76173362 on Build GRCh38	Gain	GTF2IP7 LOC107986711 MDH2 TMEM120A POR STYXL1 SNORA14A
nsv528969	Chr.7:75074053 - 76920728 on Build GRCh38	Gain	GTF2IP7 LOC105375355 SRRM3 NSUN5P1 TMEM120A POR STYXL1 PMS2P3 LOC107986711 HIP1 LOC441259 POMZP3 POM121C PMS2P2 ZP3 LOC100133091 HSPB1 RHBDD2 STAG3L1 SPDYE5 MIR4651 TRIM73 SNORA14A DTX2 FDPSP2 CCL24 LOC541473 MDH2 GTF2IRD2B SSC4D GTF2IP1 NCF1C SPDYE16 YWHAG CCL26 PMS2P10
esv3613750	Chr.7:76031380 - 76045732 on Build GRCh38	Loss	STYXL1
esv3613742	Chr.7:75912784 - 76036530 on Build GRCh38	Loss	MIR4651 TMEM120A POR STYXL1 SNORA14A
esv3613749	Chr.7:76009631 - 76035709 on Build GRCh38	Loss	STYXL1
dgv120n16	Chr.7:75440769 - 76641919 on Build GRCh38	Deletion	GTF2IP7 LOC105375355 SRRM3 TMEM120A POR STYXL1 PMS2P3 LOC107986711 HIP1 POMZP3 POM121C ZP3 LOC100133091 HSPB1 RHBDD2 SPDYE5 MIR4651 SNORA14A DTX2 FDPSP2 CCL24 MDH2 SSC4D SPDYE16 YWHAG CCL26

More Information

Additional Information:

For this assay, SNP(s) [rs77381667] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

protein dephosphorylation
intracellular signal transduction

Function(s)

protein tyrosine/serine/threonine phosphatase activity