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See other ATP6V1F CNV Assays ›
Gene Symbol
ATP6V1F
Assay Reference Genome
Location

Chr.7:128863237 on build GRCh38
Cytoband
7q32.1
Assay ID Hs03631087_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9296

Gene Name:

 ATPase H+ transporting V1 subunit F

Gene Aliases:

 ATP6S14, VATF, Vma7

Location:

 Chr.7:128862803-128865849 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP6V1F NM_001198909.1 NP_001185838.1
NM_004231.3 NP_004222.2
AK312214.1
BC104230.1 AAI04231.1
BC104231.1 AAI04232.1
BC107854.1 AAI07855.1
BG724326.1
BU683155.1
BU956696.1
CR456896.1 CAG33177.1
D49400.1 BAA08392.1
DB499437.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv464717 Chr.7:128832927 - 128876891 on Build GRCh38 Loss KCP ATP6V1F FLNC LOC100130705
esv2670312 Chr.7:128499519 - 128999613 on Build GRCh38 Deletion METTL2B IRF5 CCDC136 CALU ATP6V1F LOC100130705 KCP OPN1SW TNPO3 FLNC LINC01000 FAM71F1 FAM71F2
nsv608409 Chr.7:128843173 - 128911686 on Build GRCh38 Loss KCP ATP6V1F FLNC LOC100130705
esv2735137 Chr.7:128499440 - 128999664 on Build GRCh38 Deletion METTL2B IRF5 CCDC136 CALU ATP6V1F LOC100130705 KCP OPN1SW TNPO3 FLNC LINC01000 FAM71F1 FAM71F2
dgv11612n54 Chr.7:128818595 - 128928906 on Build GRCh38 Loss KCP CCDC136 ATP6V1F FLNC LOC100130705
dgv11611n54 Chr.7:128794846 - 128881377 on Build GRCh38 Loss KCP CCDC136 ATP6V1F FLNC LOC100130705
nsv831125 Chr.7:128772651 - 128955697 on Build GRCh38 Loss KCP IRF5 CCDC136 CALU ATP6V1F OPN1SW TNPO3 FLNC LOC100130705
esv22837 Chr.7:128774435 - 128953151 on Build GRCh38 Gain KCP IRF5 CCDC136 ATP6V1F OPN1SW FLNC LOC100130705
nsv517923 Chr.7:128805212 - 128876891 on Build GRCh38 Gain KCP CCDC136 ATP6V1F FLNC LOC100130705

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More Information


Additional Information:

For this assay, SNP(s) [rs76180727] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ATP synthase

Gene Ontology Categories:

Function(s) Process(es)


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