Hs03638819_cn

• Gene Symbol: TSC22D4
• Assay Reference Genome Location: Chr.7:100471017 on build GRCh38
• Cytoband: 7q22.1

Target Gene Details

• Entrez Gene ID: 81628
• Gene Name: TSC22 domain family member 4
• Gene Aliases: THG-1, THG1, TILZ2
• Location: Chr.7:100466519-100479279 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TSC22D4	NM_001303043.1			NP_001289972.1
	NM_030935.4			NP_112197.1
	NR_130118.1
	NR_130119.1
	AJ133115.1			CAB43491.1
	AK296580.1
	AK297702.1
	AK314824.1
	BC001486.2			AAH01486.1
	BC001966.1			AAH01966.1
	BC002972.1			AAH02972.1
	BC010406.2			AAH10406.1
	BX341171.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2734888	Chr.7:99975623 - 101290285 on Build GRCh38	Deletion	GIGYF1 GAL3ST4 AZGP1 ZKSCAN1 GNB2 ZNHIT1 AGFG2 STAG3L5P-PVRIG2P-PILRB TFR2 ACTL6B PILRB FIS1 PVRIG2P SERPINE1 SRRT MUC17 SPDYE3 PCOLCE AZGP1P1 COPS6 LOC105375429 UFSP1 ZCWPW1 ZSCAN21 VGF MIR25 PCOLCE-AS1 PVRIG EPO ACHE TSC22D4 TRIM56 MIR6840 STAG3 FBXO24 MEPCE MOGAT3 CNPY4 C7orf61 NAT16 ZASP MIR106B CLDN15 ZAN EPHB4 ZNF3 LAMTOR4 AP4M1 LRCH4 PLOD3 GATS MOSPD3 NYAP1 POP7 SAP25 PMS2P1 PPP1R35 STAG3L5P SLC12A9 AP1S1 LOC102724094 C7orf43 MUC3A MBLAC1 TAF6 TRIP6 PILRA GPC2 MCM7 MIR4653 MIR6875 MIR4658 MIR93 MUC12
nsv527050	Chr.7:100458543 - 100528352 on Build GRCh38	Loss	NYAP1 TSC22D4 C7orf61
nsv831071	Chr.7:100320402 - 100515790 on Build GRCh38	Loss	STAG3L5P-PVRIG2P-PILRB PILRA TSC22D4 PILRB NYAP1 MIR6840 PVRIG2P SPDYE3 PMS2P1 MEPCE PPP1R35 STAG3L5P C7orf61 ZCWPW1
nsv951385	Chr.7:100467278 - 100496477 on Build GRCh38	Deletion	NYAP1 TSC22D4

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
negative regulation of transcription, DNA-templated

Function(s)

transcription factor activity, sequence-specific DNA binding
protein binding