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See other PPP1R16A CNV Assays ›
Gene Symbol
PPP1R16A
Assay Reference Genome
Location

Chr.8:144487319 on build GRCh38
Cytoband
8q24.3
Assay ID Hs03655543_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84988

Gene Name:

 protein phosphatase 1 regulatory subunit 16A

Gene Aliases:

 MYPT3

Location:

 Chr.8:144477987-144502121 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPP1R16A XM_005272350.2 XP_005272407.1
XM_017013912.1 XP_016869401.1
XM_017013913.1 XP_016869402.1
XM_017013914.1 XP_016869403.1
XM_017013915.1 XP_016869404.1
AK090471.1 BAC03452.1
BM761618.1
BM762557.1
CN301973.1
DB457525.1
HY013777.1
HY050499.1
HY168641.1
HY176205.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv907n27 Chr.8:144416180 - 144525122 on Build GRCh38 Loss CYHR1 FOXH1 LOC101928953 VPS28 TONSL-AS1 MFSD3 LRRC14 RECQL4 MIR6893 LRRC24 GPT TONSL PPP1R16A SLC39A4 KIFC2
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss FBXL6 TMEM249 OPLAH MIR7112 BOP1 FOXH1 ADCK5 PARP10 LOC101928953 MIR6849 VPS28 TONSL-AS1 SLC52A2 SHARPIN MIR661 CYC1 DGAT1 RECQL4 SMPD5 MIR6846 EXOSC4 HSF1 TONSL SLC39A4 KIFC2 MIR1234 MROH1 SCRT1 MIR6848 CYHR1 PLEC GPAA1 HGH1 MFSD3 MIR6847 LRRC14 CPSF1 SPATC1 MAF1 MIR939 LOC101928902 SCX MIR6893 WDR97 GPT GRINA PPP1R16A
dgv12434n54 Chr.8:144270080 - 144516801 on Build GRCh38 Loss FBXL6 TMEM249 BOP1 FOXH1 ADCK5 LOC101928953 MIR6849 VPS28 TONSL-AS1 SLC52A2 DGAT1 RECQL4 HSF1 TONSL SLC39A4 KIFC2 MIR1234 SCRT1 MIR6848 CYHR1 MFSD3 CPSF1 MIR939 LOC101928902 MIR6893 GPT PPP1R16A
nsv612951 Chr.8:144479830 - 144677692 on Build GRCh38 Loss MFSD3 LRRC14 RECQL4 C8orf82 LRRC24 ARHGAP39 GPT LOC101928953 PPP1R16A
nsv831489 Chr.8:144342140 - 144544026 on Build GRCh38 Loss FBXL6 TMEM249 FOXH1 ADCK5 LOC101928953 MIR6849 VPS28 TONSL-AS1 SLC52A2 RECQL4 TONSL SLC39A4 KIFC2 MIR1234 CYHR1 ARHGAP39 MFSD3 LRRC14 CPSF1 MIR939 LOC101928902 MIR6893 C8orf82 LRRC24 GPT PPP1R16A
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss FBXL6 TMEM249 OPLAH MIR7112 BOP1 FOXH1 ADCK5 PARP10 LOC101928953 MIR6849 VPS28 TONSL-AS1 SLC52A2 SHARPIN MIR661 CYC1 DGAT1 RECQL4 SMPD5 MIR6846 EXOSC4 HSF1 TONSL SLC39A4 KIFC2 MIR1234 MROH1 SCRT1 MIR6848 CYHR1 PLEC GPAA1 HGH1 MFSD3 MIR6847 LRRC14 CPSF1 SPATC1 MAF1 MIR939 LOC101928902 SCX MIR6893 WDR97 GPT GRINA PPP1R16A
nsv612940 Chr.8:144436292 - 144613673 on Build GRCh38 Loss CYHR1 ARHGAP39 FOXH1 LOC101928953 TONSL-AS1 MFSD3 LRRC14 RECQL4 C8orf82 LRRC24 GPT TONSL PPP1R16A KIFC2
dgv12439n54 Chr.8:144438306 - 144525122 on Build GRCh38 Loss MFSD3 LRRC14 RECQL4 CYHR1 LRRC24 FOXH1 GPT TONSL LOC101928953 PPP1R16A TONSL-AS1 KIFC2
nsv428208 Chr.8:144041826 - 144722291 on Build GRCh38 Gain ZNF251 FBXL6 TMEM249 OPLAH MIR7112 BOP1 FOXH1 ADCK5 LOC101928953 MIR6849 VPS28 TONSL-AS1 SLC52A2 SHARPIN CYC1 DGAT1 RECQL4 SMPD5 MIR6846 EXOSC4 HSF1 TONSL SLC39A4 KIFC2 MIR1234 MROH1 SCRT1 MIR6848 CYHR1 ARHGAP39 GPAA1 HGH1 MFSD3 MIR6847 LRRC14 CPSF1 SPATC1 MAF1 MIR939 LOC101928902 SCX MIR6893 C8orf82 LRRC24 WDR97 GPT PPP1R16A
esv29999 Chr.8:144456732 - 144525122 on Build GRCh38 Loss MFSD3 LRRC14 RECQL4 CYHR1 LRRC24 FOXH1 GPT LOC101928953 PPP1R16A KIFC2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

phosphatase modulator

Gene Ontology Categories:

Function(s) Process(es)


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