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Gene Symbol
BOP1
Assay Reference Genome
Location

Chr.8:144283329 on build GRCh38
Cytoband
8q24.3
Assay ID Hs03656107_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 23246

Gene Name:

 block of proliferation 1

Gene Aliases:

 -

Location:

 Chr.8:144262046-144291438 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BOP1 NM_015201.4 NP_056016.1
AB060694.1 BAB70666.1
AK024840.1
AK290677.1
AK293719.1
AK315612.1
BC001086.2 AAH01086.2
BC005160.2 AAH05160.2
BC007274.1 AAH07274.1
BC013787.1 AAH13787.1
BC013980.2 AAH13980.1
BC017674.2 AAH17674.1
BQ711345.1
D50914.1 BAA09473.1
DA510177.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv12434n54 Chr.8:144270080 - 144516801 on Build GRCh38 Loss CPSF1 KIFC2 FBXL6 MFSD3 SLC39A4 DGAT1 TONSL-AS1 TMEM249 LOC101928902 RECQL4 CYHR1 LOC101928953 FOXH1 BOP1 ADCK5 GPT MIR1234 MIR6848 PPP1R16A SCRT1 HSF1 MIR6849 TONSL MIR6893 MIR939 VPS28 SLC52A2
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss CPSF1 LRRC14 MAF1 KIFC2 FBXL6 PLEC MFSD3 SLC39A4 DGAT1 TONSL-AS1 HGH1 TMEM249 LOC101928902 RECQL4 SPATC1 CYHR1 LOC101928953 MIR661 FOXH1 WDR97 BOP1 MROH1 SMPD5 CYC1 ADCK5 SHARPIN MIR6847 SCX GPT MIR1234 EXOSC4 MIR6848 PPP1R16A PARP10 MIR6846 SCRT1 HSF1 OPLAH GRINA MIR6849 TONSL MIR6893 MIR939 VPS28 GPAA1 MIR7112 SLC52A2
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss CPSF1 LRRC14 MAF1 KIFC2 FBXL6 PLEC MFSD3 SLC39A4 DGAT1 TONSL-AS1 HGH1 TMEM249 LOC101928902 RECQL4 SPATC1 CYHR1 LOC101928953 MIR661 FOXH1 WDR97 BOP1 MROH1 SMPD5 CYC1 ADCK5 SHARPIN MIR6847 SCX GPT MIR1234 EXOSC4 MIR6848 PPP1R16A PARP10 MIR6846 SCRT1 HSF1 OPLAH GRINA MIR6849 TONSL MIR6893 MIR939 VPS28 GPAA1 MIR7112 SLC52A2
nsv1025071 Chr.8:144044224 - 144300847 on Build GRCh38 Gain WDR97 MAF1 BOP1 MROH1 SMPD5 CYC1 SHARPIN MIR6847 SCX EXOSC4 HGH1 MIR6846 HSF1 SPATC1 OPLAH GPAA1 MIR7112
nsv428208 Chr.8:144041826 - 144722291 on Build GRCh38 Gain LRRC24 CPSF1 LRRC14 MAF1 KIFC2 FBXL6 MFSD3 SLC39A4 DGAT1 TONSL-AS1 HGH1 TMEM249 LOC101928902 RECQL4 SPATC1 CYHR1 LOC101928953 FOXH1 C8orf82 ARHGAP39 WDR97 BOP1 MROH1 SMPD5 CYC1 ADCK5 SHARPIN MIR6847 SCX GPT MIR1234 EXOSC4 MIR6848 PPP1R16A MIR6846 ZNF251 SCRT1 HSF1 OPLAH MIR6849 TONSL MIR6893 MIR939 VPS28 GPAA1 MIR7112 SLC52A2

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More Information


Additional Information:

For this assay, SNP(s) [rs67384412] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ribosomal protein

Gene Ontology Categories:

Function(s) Process(es)


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