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Gene Symbol
BOP1
Assay Reference Genome
Location

Chr.8:144283329 on build GRCh38
Cytoband
8q24.3
Assay ID Hs03656107_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 23246

Gene Name:

 block of proliferation 1

Gene Aliases:

 -

Location:

 Chr.8:144262046-144291438 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BOP1 NM_015201.4 NP_056016.1
AB060694.1 BAB70666.1
AK024840.1
AK290677.1
AK293719.1
AK315612.1
BC001086.2 AAH01086.2
BC005160.2 AAH05160.2
BC007274.1 AAH07274.1
BC013787.1 AAH13787.1
BC013980.2 AAH13980.1
BC017674.2 AAH17674.1
BQ711345.1
D50914.1 BAA09473.1
DA510177.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss CPSF1 DGAT1 MIR939 GRINA MIR6847 MIR7112 WDR97 LOC101928902 GPT EXOSC4 LOC101928953 MROH1 SMPD5 HGH1 SPATC1 SCX GPAA1 SLC52A2 SHARPIN PLEC TONSL PARP10 MIR661 ADCK5 MIR6848 MIR6849 BOP1 TONSL-AS1 VPS28 CYC1 RECQL4 OPLAH SLC39A4 TMEM249 KIFC2 HSF1 LRRC14 MAF1 MFSD3 MIR1234 MIR6893 MIR6846 PPP1R16A CYHR1 FOXH1 FBXL6 SCRT1
dgv12434n54 Chr.8:144270080 - 144516801 on Build GRCh38 Loss CPSF1 DGAT1 MIR939 LOC101928902 GPT LOC101928953 SLC52A2 TONSL ADCK5 MIR6848 MIR6849 BOP1 TONSL-AS1 VPS28 RECQL4 SLC39A4 TMEM249 KIFC2 HSF1 MFSD3 MIR1234 MIR6893 PPP1R16A CYHR1 FOXH1 FBXL6 SCRT1
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss CPSF1 DGAT1 MIR939 GRINA MIR6847 MIR7112 WDR97 LOC101928902 GPT EXOSC4 LOC101928953 MROH1 SMPD5 HGH1 SPATC1 SCX GPAA1 SLC52A2 SHARPIN PLEC TONSL PARP10 MIR661 ADCK5 MIR6848 MIR6849 BOP1 TONSL-AS1 VPS28 CYC1 RECQL4 OPLAH SLC39A4 TMEM249 KIFC2 HSF1 LRRC14 MAF1 MFSD3 MIR1234 MIR6893 MIR6846 PPP1R16A CYHR1 FOXH1 FBXL6 SCRT1
nsv428208 Chr.8:144041826 - 144722291 on Build GRCh38 Gain CPSF1 DGAT1 MIR939 MIR6847 MIR7112 WDR97 LOC101928902 GPT EXOSC4 LOC101928953 MROH1 SMPD5 HGH1 SPATC1 SCX GPAA1 ARHGAP39 C8orf82 SLC52A2 SHARPIN TONSL ADCK5 MIR6848 MIR6849 BOP1 LRRC24 TONSL-AS1 VPS28 CYC1 RECQL4 OPLAH SLC39A4 TMEM249 ZNF251 KIFC2 HSF1 LRRC14 MAF1 MFSD3 MIR1234 MIR6893 MIR6846 PPP1R16A CYHR1 FOXH1 FBXL6 SCRT1
nsv1025071 Chr.8:144044224 - 144300847 on Build GRCh38 Gain BOP1 MIR6847 CYC1 OPLAH MIR7112 HSF1 WDR97 MAF1 EXOSC4 MIR6846 MROH1 SMPD5 HGH1 SPATC1 SCX GPAA1 SHARPIN

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More Information


Additional Information:

For this assay, SNP(s) [rs67384412] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ribosomal protein

Gene Ontology Categories:

Function(s) Process(es)


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