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See other PPP1R16A CNV Assays ›
Gene Symbol
PPP1R16A
Assay Reference Genome
Location

Chr.8:144479653 on build GRCh38
Cytoband
8q24.3
Assay ID Hs03658866_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84988

Gene Name:

 protein phosphatase 1 regulatory subunit 16A

Gene Aliases:

 MYPT3

Location:

 Chr.8:144477987-144502121 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPP1R16A XM_005272350.2 XP_005272407.1
XM_017013912.1 XP_016869401.1
XM_017013913.1 XP_016869402.1
XM_017013914.1 XP_016869403.1
XM_017013915.1 XP_016869404.1
AK090471.1 BAC03452.1
BM761618.1
BM762557.1
CN301973.1
DB457525.1
HY013777.1
HY050499.1
HY168641.1
HY176205.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv612936 Chr.8:144416180 - 144479830 on Build GRCh38 Loss FOXH1 MIR6893 TONSL-AS1 KIFC2 VPS28 PPP1R16A SLC39A4 CYHR1 TONSL
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss FOXH1 GRINA SMPD5 MIR7112 TONSL-AS1 SCX VPS28 MIR6848 PPP1R16A SLC39A4 PLEC OPLAH LRRC14 SLC52A2 MIR1234 TMEM249 SPATC1 MIR939 WDR97 LOC101928902 MIR661 MIR6846 CYHR1 TONSL PARP10 BOP1 ADCK5 MROH1 KIFC2 SHARPIN CPSF1 MFSD3 DGAT1 MIR6847 GPT FBXL6 CYC1 EXOSC4 LOC101928953 MIR6893 HSF1 MAF1 MIR6849 RECQL4 HGH1 SCRT1 GPAA1
dgv12434n54 Chr.8:144270080 - 144516801 on Build GRCh38 Loss FOXH1 TONSL-AS1 VPS28 MIR6848 PPP1R16A SLC39A4 SLC52A2 MIR1234 TMEM249 MIR939 LOC101928902 CYHR1 TONSL BOP1 ADCK5 KIFC2 CPSF1 MFSD3 DGAT1 GPT FBXL6 LOC101928953 MIR6893 HSF1 MIR6849 RECQL4 SCRT1
nsv831489 Chr.8:144342140 - 144544026 on Build GRCh38 Loss FOXH1 TONSL-AS1 VPS28 PPP1R16A SLC39A4 LRRC14 SLC52A2 MIR1234 TMEM249 LRRC24 MIR939 LOC101928902 CYHR1 TONSL ADCK5 ARHGAP39 C8orf82 KIFC2 CPSF1 MFSD3 GPT FBXL6 LOC101928953 MIR6893 MIR6849 RECQL4
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss FOXH1 GRINA SMPD5 MIR7112 TONSL-AS1 SCX VPS28 MIR6848 PPP1R16A SLC39A4 PLEC OPLAH LRRC14 SLC52A2 MIR1234 TMEM249 SPATC1 MIR939 WDR97 LOC101928902 MIR661 MIR6846 CYHR1 TONSL PARP10 BOP1 ADCK5 MROH1 KIFC2 SHARPIN CPSF1 MFSD3 DGAT1 MIR6847 GPT FBXL6 CYC1 EXOSC4 LOC101928953 MIR6893 HSF1 MAF1 MIR6849 RECQL4 HGH1 SCRT1 GPAA1
nsv612940 Chr.8:144436292 - 144613673 on Build GRCh38 Loss FOXH1 ARHGAP39 TONSL-AS1 C8orf82 KIFC2 PPP1R16A MFSD3 GPT LOC101928953 LRRC14 RECQL4 LRRC24 CYHR1 TONSL
dgv12439n54 Chr.8:144438306 - 144525122 on Build GRCh38 Loss FOXH1 LOC101928953 LRRC14 TONSL-AS1 RECQL4 LRRC24 KIFC2 PPP1R16A MFSD3 CYHR1 GPT TONSL
nsv428208 Chr.8:144041826 - 144722291 on Build GRCh38 Gain FOXH1 SMPD5 MIR7112 TONSL-AS1 SCX VPS28 MIR6848 PPP1R16A SLC39A4 ZNF251 OPLAH LRRC14 SLC52A2 MIR1234 TMEM249 SPATC1 LRRC24 MIR939 WDR97 LOC101928902 MIR6846 CYHR1 TONSL BOP1 ADCK5 ARHGAP39 MROH1 C8orf82 KIFC2 SHARPIN CPSF1 MFSD3 DGAT1 MIR6847 GPT FBXL6 CYC1 EXOSC4 LOC101928953 MIR6893 HSF1 MAF1 MIR6849 RECQL4 HGH1 SCRT1 GPAA1
esv29999 Chr.8:144456732 - 144525122 on Build GRCh38 Loss FOXH1 LOC101928953 LRRC14 RECQL4 LRRC24 KIFC2 PPP1R16A MFSD3 CYHR1 GPT

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

phosphatase modulator

Gene Ontology Categories:

Function(s) Process(es)


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