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See other PPP1R16A CNV Assays ›
Gene Symbol
PPP1R16A
Assay Reference Genome
Location

Chr.8:144483214 on build GRCh38
Cytoband
8q24.3
Assay ID Hs03661170_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84988

Gene Name:

 protein phosphatase 1 regulatory subunit 16A

Gene Aliases:

 MYPT3

Location:

 Chr.8:144477987-144502121 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPP1R16A XM_005272350.2 XP_005272407.1
XM_017013912.1 XP_016869401.1
XM_017013913.1 XP_016869402.1
XM_017013914.1 XP_016869403.1
XM_017013915.1 XP_016869404.1
AK090471.1 BAC03452.1
BM761618.1
BM762557.1
CN301973.1
DB457525.1
HY013777.1
HY050499.1
HY168641.1
HY176205.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv907n27 Chr.8:144416180 - 144525122 on Build GRCh38 Loss MIR6893 GPT MFSD3 TONSL FOXH1 VPS28 RECQL4 TONSL-AS1 KIFC2 CYHR1 LRRC24 PPP1R16A LRRC14 SLC39A4 LOC101928953
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss SHARPIN GPAA1 MIR6846 SLC52A2 MIR6847 SCRT1 TONSL FBXL6 WDR97 CPSF1 TMEM249 SMPD5 FOXH1 RECQL4 LOC101928902 HGH1 KIFC2 MIR6848 SCX EXOSC4 MIR661 HSF1 DGAT1 OPLAH BOP1 LRRC14 SLC39A4 SPATC1 LOC101928953 MIR6893 GPT MIR7112 MFSD3 MIR1234 GRINA CYC1 VPS28 MIR939 TONSL-AS1 PLEC PARP10 MAF1 MIR6849 CYHR1 PPP1R16A ADCK5 MROH1
dgv12434n54 Chr.8:144270080 - 144516801 on Build GRCh38 Loss SLC52A2 SCRT1 TONSL FBXL6 CPSF1 TMEM249 FOXH1 RECQL4 LOC101928902 KIFC2 MIR6848 HSF1 DGAT1 BOP1 SLC39A4 LOC101928953 MIR6893 GPT MFSD3 MIR1234 VPS28 MIR939 TONSL-AS1 MIR6849 CYHR1 PPP1R16A ADCK5
nsv612951 Chr.8:144479830 - 144677692 on Build GRCh38 Loss C8orf82 GPT MFSD3 LRRC24 PPP1R16A LRRC14 ARHGAP39 LOC101928953 RECQL4
nsv831489 Chr.8:144342140 - 144544026 on Build GRCh38 Loss SLC52A2 TONSL FBXL6 CPSF1 TMEM249 FOXH1 RECQL4 LOC101928902 KIFC2 LRRC14 SLC39A4 LOC101928953 MIR6893 GPT MFSD3 MIR1234 VPS28 MIR939 TONSL-AS1 C8orf82 MIR6849 CYHR1 LRRC24 PPP1R16A ARHGAP39 ADCK5
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss SHARPIN GPAA1 MIR6846 SLC52A2 MIR6847 SCRT1 TONSL FBXL6 WDR97 CPSF1 TMEM249 SMPD5 FOXH1 RECQL4 LOC101928902 HGH1 KIFC2 MIR6848 SCX EXOSC4 MIR661 HSF1 DGAT1 OPLAH BOP1 LRRC14 SLC39A4 SPATC1 LOC101928953 MIR6893 GPT MIR7112 MFSD3 MIR1234 GRINA CYC1 VPS28 MIR939 TONSL-AS1 PLEC PARP10 MAF1 MIR6849 CYHR1 PPP1R16A ADCK5 MROH1
nsv612940 Chr.8:144436292 - 144613673 on Build GRCh38 Loss GPT MFSD3 TONSL FOXH1 RECQL4 TONSL-AS1 C8orf82 KIFC2 CYHR1 LRRC24 PPP1R16A LRRC14 ARHGAP39 LOC101928953
dgv12439n54 Chr.8:144438306 - 144525122 on Build GRCh38 Loss KIFC2 GPT MFSD3 TONSL CYHR1 LRRC24 PPP1R16A LRRC14 LOC101928953 FOXH1 RECQL4 TONSL-AS1
nsv428208 Chr.8:144041826 - 144722291 on Build GRCh38 Gain SHARPIN GPAA1 MIR6846 SLC52A2 MIR6847 SCRT1 TONSL FBXL6 WDR97 CPSF1 TMEM249 SMPD5 FOXH1 RECQL4 LOC101928902 HGH1 ZNF251 KIFC2 MIR6848 SCX EXOSC4 HSF1 DGAT1 OPLAH BOP1 LRRC14 SLC39A4 SPATC1 LOC101928953 MIR6893 GPT MIR7112 MFSD3 MIR1234 CYC1 VPS28 MIR939 TONSL-AS1 C8orf82 MAF1 MIR6849 CYHR1 LRRC24 PPP1R16A ARHGAP39 ADCK5 MROH1
esv29999 Chr.8:144456732 - 144525122 on Build GRCh38 Loss KIFC2 GPT MFSD3 CYHR1 LRRC24 PPP1R16A LRRC14 LOC101928953 FOXH1 RECQL4

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

phosphatase modulator

Gene Ontology Categories:

Function(s) Process(es)


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