Hs03666120_cn

• Gene Symbol: PPP1R16A
• Assay Reference Genome Location: Chr.8:144496374 on build GRCh38
• Cytoband: 8q24.3

Target Gene Details

• Entrez Gene ID: 84988
• Gene Name: protein phosphatase 1 regulatory subunit 16A
• Gene Aliases: MYPT3
• Location: Chr.8:144477987-144502121 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PPP1R16A	XM_005272350.2			XP_005272407.1
	XM_017013912.1			XP_016869401.1
	XM_017013913.1			XP_016869402.1
	XM_017013914.1			XP_016869403.1
	XM_017013915.1			XP_016869404.1
	AK090471.1			BAC03452.1
	BM761618.1
	BM762557.1
	CN301973.1
	DB457525.1
	HY013777.1
	HY050499.1
	HY168641.1
	HY176205.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv907n27	Chr.8:144416180 - 144525122 on Build GRCh38	Loss	LRRC24 TONSL VPS28 CYHR1 TONSL-AS1 RECQL4 LRRC14 KIFC2 FOXH1 PPP1R16A SLC39A4 LOC101928953 MIR6893 MFSD3 GPT
nsv470249	Chr.8:143889098 - 144519234 on Build GRCh38	Loss	FBXL6 GRINA TONSL TMEM249 MIR6848 MIR939 MAF1 MIR7112 SCX SCRT1 MROH1 BOP1 OPLAH EXOSC4 LOC101928902 SMPD5 KIFC2 FOXH1 GPAA1 SLC39A4 PARP10 SLC52A2 WDR97 MIR6849 MIR6846 SHARPIN CYC1 HSF1 VPS28 SPATC1 MIR1234 CYHR1 TONSL-AS1 RECQL4 HGH1 LRRC14 ADCK5 PLEC PPP1R16A LOC101928953 MIR6893 DGAT1 CPSF1 MFSD3 GPT MIR661 MIR6847
dgv12434n54	Chr.8:144270080 - 144516801 on Build GRCh38	Loss	FBXL6 TONSL TMEM249 MIR6848 MIR939 SCRT1 BOP1 LOC101928902 KIFC2 FOXH1 SLC39A4 SLC52A2 MIR6849 HSF1 VPS28 MIR1234 CYHR1 TONSL-AS1 RECQL4 ADCK5 PPP1R16A LOC101928953 MIR6893 DGAT1 CPSF1 MFSD3 GPT
dgv12442n54	Chr.8:144492696 - 144516381 on Build GRCh38	Loss	RECQL4 PPP1R16A LOC101928953 MFSD3 GPT
nsv612951	Chr.8:144479830 - 144677692 on Build GRCh38	Loss	C8orf82 ARHGAP39 LRRC24 RECQL4 LRRC14 PPP1R16A LOC101928953 MFSD3 GPT
nsv831489	Chr.8:144342140 - 144544026 on Build GRCh38	Loss	C8orf82 FBXL6 TONSL TMEM249 MIR939 ARHGAP39 LOC101928902 KIFC2 FOXH1 SLC39A4 SLC52A2 MIR6849 LRRC24 VPS28 MIR1234 CYHR1 TONSL-AS1 RECQL4 LRRC14 ADCK5 PPP1R16A LOC101928953 MIR6893 CPSF1 MFSD3 GPT
nsv515809	Chr.8:143904439 - 144519234 on Build GRCh38	Gain+Loss	FBXL6 GRINA TONSL TMEM249 MIR6848 MIR939 MAF1 MIR7112 SCX SCRT1 MROH1 BOP1 OPLAH EXOSC4 LOC101928902 SMPD5 KIFC2 FOXH1 GPAA1 SLC39A4 PARP10 SLC52A2 WDR97 MIR6849 MIR6846 SHARPIN CYC1 HSF1 VPS28 SPATC1 MIR1234 CYHR1 TONSL-AS1 RECQL4 HGH1 LRRC14 ADCK5 PLEC PPP1R16A LOC101928953 MIR6893 DGAT1 CPSF1 MFSD3 GPT MIR661 MIR6847
nsv612940	Chr.8:144436292 - 144613673 on Build GRCh38	Loss	C8orf82 LRRC24 TONSL CYHR1 TONSL-AS1 ARHGAP39 RECQL4 LRRC14 KIFC2 FOXH1 PPP1R16A LOC101928953 MFSD3 GPT
dgv12439n54	Chr.8:144438306 - 144525122 on Build GRCh38	Loss	LRRC24 RECQL4 TONSL LRRC14 KIFC2 FOXH1 PPP1R16A LOC101928953 CYHR1 MFSD3 GPT TONSL-AS1
nsv428208	Chr.8:144041826 - 144722291 on Build GRCh38	Gain	C8orf82 FBXL6 TONSL TMEM249 MIR6848 MIR939 MAF1 MIR7112 SCX SCRT1 MROH1 BOP1 OPLAH ARHGAP39 EXOSC4 LOC101928902 SMPD5 KIFC2 FOXH1 GPAA1 SLC39A4 SLC52A2 WDR97 MIR6849 LRRC24 MIR6846 SHARPIN ZNF251 CYC1 HSF1 VPS28 SPATC1 MIR1234 CYHR1 TONSL-AS1 RECQL4 HGH1 LRRC14 ADCK5 PPP1R16A LOC101928953 MIR6893 DGAT1 CPSF1 MFSD3 GPT MIR6847
nsv612955	Chr.8:144494912 - 144502322 on Build GRCh38	Loss	PPP1R16A LOC101928953 GPT
esv29999	Chr.8:144456732 - 144525122 on Build GRCh38	Loss	LRRC24 RECQL4 LRRC14 KIFC2 FOXH1 PPP1R16A LOC101928953 CYHR1 MFSD3 GPT

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

phosphatase modulator

Gene Ontology Categories:

Process(es)

regulation of catalytic activity

Function(s)

protein binding
protein phosphatase type 1 regulator activity