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See other PPP1R16A CNV Assays ›
Gene Symbol
PPP1R16A
Assay Reference Genome
Location

Chr.8:144490660 on build GRCh38
Cytoband
8q24.3
Assay ID Hs03671022_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84988

Gene Name:

 protein phosphatase 1 regulatory subunit 16A

Gene Aliases:

 MYPT3

Location:

 Chr.8:144477987-144502121 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPP1R16A XM_005272350.2 XP_005272407.1
XM_017013912.1 XP_016869401.1
XM_017013913.1 XP_016869402.1
XM_017013914.1 XP_016869403.1
XM_017013915.1 XP_016869404.1
AK090471.1 BAC03452.1
BM761618.1
BM762557.1
CN301973.1
DB457525.1
HY013777.1
HY050499.1
HY168641.1
HY176205.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv907n27 Chr.8:144416180 - 144525122 on Build GRCh38 Loss TONSL-AS1 TONSL FOXH1 LRRC14 PPP1R16A RECQL4 MIR6893 CYHR1 VPS28 KIFC2 MFSD3 LOC101928953 LRRC24 GPT SLC39A4
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss MIR6848 TMEM249 SMPD5 FOXH1 LRRC14 RECQL4 SCX CPSF1 FBXL6 LOC101928902 GRINA GPAA1 OPLAH MIR6893 PLEC SCRT1 SLC52A2 MROH1 GPT BOP1 MIR6847 MIR7112 SLC39A4 TONSL-AS1 MIR6849 SHARPIN TONSL PPP1R16A MIR1234 WDR97 HSF1 ADCK5 HGH1 MIR661 CYC1 CYHR1 VPS28 KIFC2 MIR939 MFSD3 DGAT1 LOC101928953 EXOSC4 SPATC1 MIR6846 MAF1 PARP10
dgv12434n54 Chr.8:144270080 - 144516801 on Build GRCh38 Loss MIR6848 TMEM249 FOXH1 RECQL4 CPSF1 FBXL6 LOC101928902 MIR6893 SCRT1 SLC52A2 GPT BOP1 SLC39A4 TONSL-AS1 MIR6849 TONSL PPP1R16A MIR1234 HSF1 ADCK5 CYHR1 VPS28 KIFC2 MIR939 MFSD3 DGAT1 LOC101928953
nsv612951 Chr.8:144479830 - 144677692 on Build GRCh38 Loss ARHGAP39 MFSD3 LRRC14 PPP1R16A LOC101928953 RECQL4 C8orf82 LRRC24 GPT
nsv831489 Chr.8:144342140 - 144544026 on Build GRCh38 Loss TMEM249 ARHGAP39 FOXH1 LRRC14 RECQL4 CPSF1 FBXL6 LOC101928902 MIR6893 SLC52A2 LRRC24 GPT SLC39A4 TONSL-AS1 MIR6849 TONSL PPP1R16A MIR1234 ADCK5 CYHR1 VPS28 KIFC2 MIR939 MFSD3 LOC101928953 C8orf82
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss MIR6848 TMEM249 SMPD5 FOXH1 LRRC14 RECQL4 SCX CPSF1 FBXL6 LOC101928902 GRINA GPAA1 OPLAH MIR6893 PLEC SCRT1 SLC52A2 MROH1 GPT BOP1 MIR6847 MIR7112 SLC39A4 TONSL-AS1 MIR6849 SHARPIN TONSL PPP1R16A MIR1234 WDR97 HSF1 ADCK5 HGH1 MIR661 CYC1 CYHR1 VPS28 KIFC2 MIR939 MFSD3 DGAT1 LOC101928953 EXOSC4 SPATC1 MIR6846 MAF1 PARP10
nsv612940 Chr.8:144436292 - 144613673 on Build GRCh38 Loss TONSL-AS1 ARHGAP39 TONSL FOXH1 LRRC14 PPP1R16A RECQL4 CYHR1 KIFC2 MFSD3 LOC101928953 C8orf82 LRRC24 GPT
dgv12439n54 Chr.8:144438306 - 144525122 on Build GRCh38 Loss TONSL-AS1 CYHR1 KIFC2 MFSD3 TONSL FOXH1 LRRC14 PPP1R16A LOC101928953 RECQL4 LRRC24 GPT
nsv428208 Chr.8:144041826 - 144722291 on Build GRCh38 Gain MIR6848 TMEM249 ARHGAP39 SMPD5 FOXH1 LRRC14 RECQL4 SCX CPSF1 FBXL6 LOC101928902 GPAA1 OPLAH MIR6893 SCRT1 SLC52A2 MROH1 LRRC24 GPT BOP1 MIR6847 MIR7112 SLC39A4 TONSL-AS1 MIR6849 SHARPIN TONSL PPP1R16A MIR1234 WDR97 HSF1 ADCK5 HGH1 CYC1 ZNF251 CYHR1 VPS28 KIFC2 MIR939 MFSD3 DGAT1 LOC101928953 EXOSC4 C8orf82 SPATC1 MIR6846 MAF1
esv29999 Chr.8:144456732 - 144525122 on Build GRCh38 Loss CYHR1 KIFC2 MFSD3 FOXH1 LRRC14 PPP1R16A LOC101928953 RECQL4 LRRC24 GPT

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

phosphatase modulator

Gene Ontology Categories:

Function(s) Process(es)


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