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See other SMPD5 CNV Assays ›
Gene Symbol
SMPD5
Assay Reference Genome
Location

Chr.8:144050224 on build GRCh38
Cytoband
8q24.3
Assay ID Hs03671291_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 392275

Gene Name:

 sphingomyelin phosphodiesterase 5

Gene Aliases:

 MA-nSMase

Location:

 Chr.8:144048677-144051220 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SMPD5 XM_017014128.1 XP_016869617.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv824801 Chr.8:144046683 - 144059698 on Build GRCh38 Gain OPLAH SMPD5 SPATC1 MIR6846
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss LOC101928953 MAF1 DGAT1 CYHR1 MIR661 PARP10 WDR97 MIR6893 BOP1 SPATC1 PLEC KIFC2 FBXL6 GRINA VPS28 OPLAH LRRC14 MIR6847 MFSD3 TMEM249 FOXH1 CYC1 MIR7112 MIR939 MIR1234 MIR6848 LOC101928902 HGH1 MROH1 GPT RECQL4 HSF1 MIR6846 GPAA1 ADCK5 MIR6849 TONSL-AS1 SCRT1 SMPD5 SLC52A2 TONSL CPSF1 PPP1R16A SLC39A4 SHARPIN SCX EXOSC4
nsv612914 Chr.8:143972494 - 144120626 on Build GRCh38 Loss MAF1 PARP10 WDR97 SPATC1 MIR6846 PLEC GPAA1 GRINA OPLAH SMPD5 MIR6847 CYC1 SHARPIN EXOSC4
nsv950015 Chr.8:143866633 - 144125597 on Build GRCh38 Deletion MAF1 MIR661 PARP10 WDR97 EPPK1 SPATC1 MIR6846 PLEC GPAA1 GRINA OPLAH SMPD5 MIR6847 CYC1 SHARPIN EXOSC4
nsv1161815 Chr.8:143775169 - 144080674 on Build GRCh38 Deletion MIR937 LOC642574 NRBP2 MIR661 PARP10 MIR6845 PUF60 EPPK1 SPATC1 MIR6846 PLEC GRINA OPLAH SMPD5 MIR6847 SCRIB EXOSC4
nsv612916 Chr.8:144044224 - 144056712 on Build GRCh38 Loss OPLAH SMPD5 SPATC1
nsv612915 Chr.8:144007080 - 144224185 on Build GRCh38 Loss MAF1 WDR97 SPATC1 MIR6846 GPAA1 OPLAH SMPD5 MIR6847 CYC1 SHARPIN HGH1 MROH1 EXOSC4
nsv612917 Chr.8:144045204 - 144063598 on Build GRCh38 Loss OPLAH SMPD5 SPATC1 MIR6846
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss LOC101928953 MAF1 DGAT1 CYHR1 MIR661 PARP10 WDR97 MIR6893 BOP1 SPATC1 PLEC KIFC2 FBXL6 GRINA VPS28 OPLAH LRRC14 MIR6847 MFSD3 TMEM249 FOXH1 CYC1 MIR7112 MIR939 MIR1234 MIR6848 LOC101928902 HGH1 MROH1 GPT RECQL4 HSF1 MIR6846 GPAA1 ADCK5 MIR6849 TONSL-AS1 SCRT1 SMPD5 SLC52A2 TONSL CPSF1 PPP1R16A SLC39A4 SHARPIN SCX EXOSC4
dgv12431n54 Chr.8:143845100 - 144161320 on Build GRCh38 Loss MAF1 MIR661 PARP10 WDR97 EPPK1 SPATC1 MIR6846 PLEC GPAA1 GRINA OPLAH SMPD5 MIR6847 CYC1 SHARPIN HGH1 MROH1 EXOSC4
nsv428208 Chr.8:144041826 - 144722291 on Build GRCh38 Gain LOC101928953 MAF1 DGAT1 CYHR1 C8orf82 WDR97 MIR6893 BOP1 SPATC1 KIFC2 FBXL6 VPS28 ARHGAP39 OPLAH LRRC14 MIR6847 MFSD3 TMEM249 FOXH1 CYC1 ZNF251 MIR7112 MIR939 MIR1234 LRRC24 MIR6848 LOC101928902 HGH1 MROH1 GPT RECQL4 HSF1 MIR6846 GPAA1 ADCK5 MIR6849 TONSL-AS1 SCRT1 SMPD5 SLC52A2 TONSL CPSF1 PPP1R16A SLC39A4 SHARPIN SCX EXOSC4
nsv470250 Chr.8:143917934 - 144097007 on Build GRCh38 Gain OPLAH SMPD5 MIR6847 MIR661 PARP10 CYC1 SPATC1 MIR6846 PLEC GPAA1 EXOSC4 GRINA
dgv12433n54 Chr.8:143902404 - 144120626 on Build GRCh38 Gain MAF1 MIR661 PARP10 WDR97 SPATC1 MIR6846 PLEC GPAA1 GRINA OPLAH SMPD5 MIR6847 CYC1 SHARPIN EXOSC4
nsv612906 Chr.8:143917935 - 144090784 on Build GRCh38 Loss OPLAH SMPD5 MIR6847 MIR661 PARP10 SPATC1 MIR6846 PLEC GPAA1 EXOSC4 GRINA

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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