Hs03686957_cn

• Gene Symbol: ODF1
• Assay Reference Genome Location: Chr.8:102559747 on build GRCh38
• Cytoband: 8q22.3

Target Gene Details

• Entrez Gene ID: 4956
• Gene Name: outer dense fiber of sperm tails 1
• Gene Aliases: CT133, HSPB10, ODF, ODF2, ODF27, ODFP, ODFPG, ODFPGA, ODFPGB, RT7, SODF
• Location: Chr.8:102551620-102561017 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ODF1	NM_024410.3			NP_077721.2
	AK315276.1
	BC104456.1			AAI04457.1
	BC104457.1			AAI04458.1
	DB457574.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3618226	Chr.8:102558699 - 102560292 on Build GRCh38	Loss	ODF1
esv3618224	Chr.8:102532605 - 102572593 on Build GRCh38	Gain	ODF1
esv2762761	Chr.8:102480128 - 102613016 on Build GRCh38	Gain	ODF1
esv3576598	Chr.8:102200959 - 102574604 on Build GRCh38	Gain	RRM2B UBR5-AS1 ODF1 UBR5
esv33118	Chr.8:102346339 - 103055944 on Build GRCh38	Loss	LOC107986873 KLF10 ODF1 ATP6V1C1 UBR5 LOC401472 LOC101927245 AZIN1 AZIN1-AS1
esv2669040	Chr.8:102558704 - 102560293 on Build GRCh38	Deletion	ODF1
nsv1024876	Chr.8:102500557 - 102564430 on Build GRCh38	Gain	ODF1
esv22177	Chr.8:102558710 - 102560297 on Build GRCh38	Loss	ODF1

More Information

Additional Information:

For this assay, SNP(s) [rs73701168] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

multicellular organism development
spermatogenesis
cell differentiation

Function(s)

protein binding
protein domain specific binding