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See other PPP1R16A CNV Assays ›
Gene Symbol
PPP1R16A
Assay Reference Genome
Location

Chr.8:144484403 on build GRCh38
Cytoband
8q24.3
Assay ID Hs03691600_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84988

Gene Name:

 protein phosphatase 1 regulatory subunit 16A

Gene Aliases:

 MYPT3

Location:

 Chr.8:144477987-144502121 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPP1R16A XM_005272350.2 XP_005272407.1
XM_017013912.1 XP_016869401.1
XM_017013913.1 XP_016869402.1
XM_017013914.1 XP_016869403.1
XM_017013915.1 XP_016869404.1
AK090471.1 BAC03452.1
BM761618.1
BM762557.1
CN301973.1
DB457525.1
HY013777.1
HY050499.1
HY168641.1
HY176205.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv907n27 Chr.8:144416180 - 144525122 on Build GRCh38 Loss MFSD3 SLC39A4 FOXH1 GPT CYHR1 LOC101928953 LRRC24 MIR6893 TONSL TONSL-AS1 PPP1R16A VPS28 KIFC2 RECQL4 LRRC14
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss GRINA MFSD3 SPATC1 GPT CYHR1 MIR7112 SCX SCRT1 CYC1 TONSL TONSL-AS1 KIFC2 PLEC ADCK5 BOP1 FBXL6 SLC52A2 MROH1 WDR97 SLC39A4 FOXH1 LOC101928953 DGAT1 SHARPIN PARP10 MIR6847 TMEM249 MIR939 LOC101928902 MIR661 HGH1 MIR6893 HSF1 CPSF1 EXOSC4 MIR6849 MIR6848 GPAA1 SMPD5 MIR1234 MAF1 PPP1R16A MIR6846 OPLAH VPS28 RECQL4 LRRC14
dgv12434n54 Chr.8:144270080 - 144516801 on Build GRCh38 Loss MFSD3 GPT CYHR1 SCRT1 TONSL TONSL-AS1 KIFC2 ADCK5 BOP1 FBXL6 SLC52A2 SLC39A4 FOXH1 LOC101928953 DGAT1 TMEM249 MIR939 LOC101928902 MIR6893 HSF1 CPSF1 MIR6849 MIR6848 MIR1234 PPP1R16A VPS28 RECQL4
nsv612951 Chr.8:144479830 - 144677692 on Build GRCh38 Loss LRRC24 MFSD3 GPT LOC101928953 ARHGAP39 PPP1R16A RECQL4 LRRC14 C8orf82
nsv831489 Chr.8:144342140 - 144544026 on Build GRCh38 Loss MFSD3 GPT CYHR1 LRRC24 TONSL TONSL-AS1 KIFC2 ADCK5 FBXL6 SLC52A2 SLC39A4 FOXH1 LOC101928953 TMEM249 MIR939 LOC101928902 MIR6893 CPSF1 MIR6849 MIR1234 ARHGAP39 PPP1R16A VPS28 RECQL4 LRRC14 C8orf82
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss GRINA MFSD3 SPATC1 GPT CYHR1 MIR7112 SCX SCRT1 CYC1 TONSL TONSL-AS1 KIFC2 PLEC ADCK5 BOP1 FBXL6 SLC52A2 MROH1 WDR97 SLC39A4 FOXH1 LOC101928953 DGAT1 SHARPIN PARP10 MIR6847 TMEM249 MIR939 LOC101928902 MIR661 HGH1 MIR6893 HSF1 CPSF1 EXOSC4 MIR6849 MIR6848 GPAA1 SMPD5 MIR1234 MAF1 PPP1R16A MIR6846 OPLAH VPS28 RECQL4 LRRC14
nsv612940 Chr.8:144436292 - 144613673 on Build GRCh38 Loss MFSD3 FOXH1 GPT CYHR1 LOC101928953 LRRC24 TONSL TONSL-AS1 ARHGAP39 PPP1R16A KIFC2 RECQL4 LRRC14 C8orf82
dgv12439n54 Chr.8:144438306 - 144525122 on Build GRCh38 Loss LRRC24 MFSD3 TONSL FOXH1 TONSL-AS1 GPT CYHR1 LOC101928953 PPP1R16A KIFC2 RECQL4 LRRC14
nsv428208 Chr.8:144041826 - 144722291 on Build GRCh38 Gain MFSD3 SPATC1 GPT CYHR1 MIR7112 SCX SCRT1 CYC1 LRRC24 TONSL TONSL-AS1 KIFC2 ADCK5 BOP1 FBXL6 SLC52A2 MROH1 WDR97 SLC39A4 FOXH1 LOC101928953 DGAT1 SHARPIN MIR6847 TMEM249 ZNF251 MIR939 LOC101928902 HGH1 MIR6893 HSF1 CPSF1 EXOSC4 MIR6849 MIR6848 GPAA1 SMPD5 MIR1234 ARHGAP39 MAF1 PPP1R16A MIR6846 OPLAH VPS28 RECQL4 LRRC14 C8orf82
esv29999 Chr.8:144456732 - 144525122 on Build GRCh38 Loss LRRC24 MFSD3 FOXH1 GPT CYHR1 LOC101928953 PPP1R16A KIFC2 RECQL4 LRRC14

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

phosphatase modulator

Gene Ontology Categories:

Function(s) Process(es)


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