Hs03701375_cn

• Gene Symbol: EGFL7
• Assay Reference Genome Location: Chr.9:136656216 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 51162
• Gene Name: EGF like domain multiple 7
• Gene Aliases: NEU1, VE-STATIN, ZNEU1
• Location: Chr.9:136654753-136672678 on Build GRCh38
• Assay Gene Location:

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EGFL7

Target Gene Details

• Entrez Gene ID: 101928612
• Gene Name: uncharacterized LOC101928612
• Gene Aliases: -
• Location: Chr.9:136648610-136660421 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HSPC324	NR_135132.1
	AF161442.1			AAF29002.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv13005n54	Chr.9:136605258 - 136696482 on Build GRCh38	Loss	LINC01451 EGFL7 AGPAT2 HSPC324 MIR126
nsv509334	Chr.9:136514168 - 136724663 on Build GRCh38	Insertion	NALT1 LINC01451 MIR4673 EGFL7 SNHG7 MIR4674 NOTCH1 AGPAT2 HSPC324 MIR126 FAM69B
nsv951203	Chr.9:136562849 - 136770848 on Build GRCh38	Deletion	LINC01451 EGFL7 LCN6 FAM69B SNORA17B LCN10 LOC100128593 SNHG7 AGPAT2 SNORA17A HSPC324 MIR6722 LCN8 MIR126 LCN15
esv2759720	Chr.9:136356377 - 136932033 on Build GRCh38	Loss	LINC01451 EDF1 EGFL7 TMEM141 LCN6 PHPT1 SNAPC4 TRAF2 SDCCAG3 FAM69B LCN10 CCDC183 C9orf163 RABL6 MIR4292 CARD9 SNHG7 NOTCH1 AGPAT2 SNORA17A MIR4479 GPSM1 LCN8 LCN15 SEC16A NALT1 DNLZ MIR4673 CCDC183-AS1 MIR4674 C9orf172 SNORA17B PMPCA LOC100128593 INPP5E HSPC324 MIR6722 MIR126 MAMDC4
nsv469918	Chr.9:136359865 - 137173890 on Build GRCh38	Loss	NPDC1 TMEM141 LCN10 CCDC183 C9orf163 RABL6 MIR4292 CARD9 SNHG7 SNORA17A LCN8 C9orf142 NALT1 DNLZ LRRC26 PTGDS PMPCA FBXW5 DPP7 MAN1B1 LOC100128593 INPP5E C9orf139 MIR126 C8G LINC01451 EDF1 EGFL7 LCN6 PHPT1 UAP1L1 MAN1B1-AS1 SNAPC4 TRAF2 LOC101930307 SDCCAG3 FAM69B SAPCD2 NOTCH1 AGPAT2 MIR4479 LCNL1 ABCA2 GRIN1 LCN15 SEC16A MIR4673 ENTPD2 LCN12 CCDC183-AS1 CLIC3 MIR4674 C9orf172 SNORA17B MIR3621 FUT7 PRR31 TMEM210 HSPC324 MIR6722 MAMDC4
nsv8579	Chr.9:136505432 - 136760256 on Build GRCh38	Gain	NALT1 LINC01451 MIR4673 EGFL7 LCN6 MIR4674 FAM69B SNORA17B LCN10 LOC100128593 SNHG7 NOTCH1 AGPAT2 SNORA17A HSPC324 MIR6722 LCN8 MIR126 LCN15
dgv955n27	Chr.9:136583078 - 136676165 on Build GRCh38	Loss	LINC01451 EGFL7 AGPAT2 HSPC324 MIR126
nsv1053781	Chr.9:136590694 - 136722927 on Build GRCh38	Gain	LINC01451 EGFL7 AGPAT2 HSPC324 MIR126 FAM69B
dgv13006n54	Chr.9:136619086 - 136725859 on Build GRCh38	Loss	EGFL7 SNHG7 AGPAT2 HSPC324 MIR126 FAM69B
esv2422220	Chr.9:136584135 - 137350098 on Build GRCh38	Deletion	RNF208 STPG3 NPDC1 TMEM141 RNF224 LCN10 CCDC183 RABL6 MIR4292 EXD3 SNHG7 SNORA17A LCN8 C9orf142 LRRC26 C9orf173-AS1 PTGDS FBXW5 DPP7 MAN1B1 LOC100128593 C9orf139 TUBB4B MIR126 C8G LINC01451 EDF1 EGFL7 SSNA1 LCN6 PHPT1 TPRN UAP1L1 MAN1B1-AS1 TRAF2 LOC101930307 TOR4A FAM69B SAPCD2 AGPAT2 MIR4479 NELFB LCNL1 ABCA2 GRIN1 LCN15 SLC34A3 ENTPD2 LCN12 CYSRT1 CCDC183-AS1 CLIC3 C9orf172 TMEM203 SNORA17B NRARP MIR3621 NDOR1 FUT7 PRR31 FAM166A TMEM210 HSPC324 MIR6722 ANAPC2 MAMDC4

More Information

Additional Information:

For this assay, SNP(s) [rs78750992] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation