Hs03715377_cn

• Gene Symbol: NDOR1
• Assay Reference Genome Location: Chr.9:137218084 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 27158
• Gene Name: NADPH dependent diflavin oxidoreductase 1
• Gene Aliases: NR1, bA350O14.9
• Location: Chr.9:137205667-137219361 on Build GRCh38
• Assay Gene Location: Within Exon 13

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NDOR1	NM_001144026.2	14	3600	NP_001137498.1
	NM_001144027.2	13	3449	NP_001137499.1
	NM_001144028.2	14	3552	NP_001137500.1
	NM_014434.3	14	3573	NP_055249.1
	XM_011518545.1	13	3488	XP_011516847.1
	XM_011518547.1	14	3390	XP_011516849.1
	XM_011518548.2	13	4790	XP_011516850.1
	XM_017014627.1	14	3551	XP_016870116.1
	AL133632.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv13010n54	Chr.9:137191539 - 137233413 on Build GRCh38	Loss	TMEM203 TPRN CYSRT1 RNF208 RNF224 SLC34A3 NDOR1
nsv616012	Chr.9:137197680 - 137223834 on Build GRCh38	Loss	TMEM203 TPRN RNF208 NDOR1
nsv616007	Chr.9:137079368 - 137240666 on Build GRCh38	Loss	MIR3621 TMEM203 SSNA1 RNF208 TMEM210 DPP7 RNF224 NDOR1 UAP1L1 LRRC26 MAN1B1 TPRN CYSRT1 GRIN1 LOC101930307 SLC34A3 ANAPC2 MAN1B1-AS1
dgv13009n54	Chr.9:137173890 - 137327859 on Build GRCh38	Loss	TOR4A TMEM203 SSNA1 RNF208 FAM166A RNF224 NDOR1 C9orf173-AS1 EXD3 NELFB STPG3 TUBB4B TPRN CYSRT1 NRARP SLC34A3 ANAPC2
nsv524322	Chr.9:136795692 - 137482216 on Build GRCh38	Loss	TOR4A TMEM203 PTGDS RNF208 TMEM210 DPP7 PNPLA7 TRAF2 EXD3 FUT7 NELFB TPRN MIR7114 ENTPD2 ANAPC2 MIR3621 MIR4479 SSNA1 ENTPD8 LCNL1 RNF224 UAP1L1 C9orf172 MAN1B1 STPG3 TUBB4B NPDC1 RABL6 LOC101930307 SLC34A3 LCN12 NOXA1 MAMDC4 CCDC183-AS1 PHPT1 C8G C9orf173-AS1 FBXW5 PRR31 CCDC183 CYSRT1 NRARP C9orf142 MAN1B1-AS1 SAPCD2 FAM166A NDOR1 ABCA2 LRRC26 NSMF C9orf139 EDF1 GRIN1 MIR4292 CLIC3
nsv951207	Chr.9:137136949 - 137379148 on Build GRCh38	Deletion	MIR3621 TOR4A TMEM203 SSNA1 RNF208 TMEM210 FAM166A RNF224 NDOR1 C9orf173-AS1 EXD3 LRRC26 NELFB STPG3 TUBB4B TPRN CYSRT1 GRIN1 NRARP SLC34A3 ANAPC2
nsv1161918	Chr.9:137118319 - 137438026 on Build GRCh38	Duplication	MIR3621 NOXA1 TOR4A TMEM203 SSNA1 ENTPD8 RNF208 TMEM210 FAM166A RNF224 NDOR1 C9orf173-AS1 EXD3 LRRC26 NELFB STPG3 TUBB4B TPRN CYSRT1 GRIN1 NRARP SLC34A3 ANAPC2
esv2422220	Chr.9:136584135 - 137350098 on Build GRCh38	Deletion	SNORA17B TOR4A TMEM203 PTGDS RNF208 LCN8 TMEM210 DPP7 SNHG7 TRAF2 EXD3 FUT7 LINC01451 NELFB TPRN ENTPD2 ANAPC2 MIR3621 LCN6 SNORA17A MIR4479 SSNA1 LCNL1 RNF224 UAP1L1 C9orf172 TMEM141 MAN1B1 STPG3 TUBB4B NPDC1 RABL6 LOC100128593 LOC101930307 MIR126 SLC34A3 LCN12 MAMDC4 CCDC183-AS1 PHPT1 C8G C9orf173-AS1 FBXW5 PRR31 CCDC183 CYSRT1 NRARP C9orf142 MAN1B1-AS1 AGPAT2 LCN15 MIR6722 EGFL7 SAPCD2 FAM166A NDOR1 ABCA2 HSPC324 LRRC26 C9orf139 EDF1 GRIN1 FAM69B MIR4292 CLIC3 LCN10

More Information

Additional Information:

For this assay, SNP(s) [rs116151678] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

oxidoreductase

Gene Ontology Categories:

Process(es)

cell death
iron-sulfur cluster assembly
cellular response to menadione
oxidation-reduction process

Function(s)

NADPH-hemoprotein reductase activity
protein binding
FMN binding
oxidoreductase activity
flavin adenine dinucleotide binding
NADP binding