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See other PNPLA2 CNV Assays ›
Gene Symbol
PNPLA2
Assay Reference Genome
Location

Chr.11:820208 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03799592_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57104

Gene Name:

 patatin like phospholipase domain containing 2

Gene Aliases:

 1110001C14Rik, ATGL, FP17548, PEDF-R, TTS-2.2, TTS2, iPLA2zeta

Location:

 Chr.11:818895-825573 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PNPLA2 NM_020376.3 NP_065109.1
XM_006718265.3 XP_006718328.1
XM_006718266.3 XP_006718329.1
XM_017018028.1 XP_016873517.1
AJ278475.1 CAC01131.1
AJ278476.1 CAC01132.1
AK308435.1
AY894804.1 AAW81962.1
BC017280.2 AAH17280.1
HQ651812.1
JF279441.1
JF279442.1
KF601369.1
KF833264.1
KF833265.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss CD151 LOC171391 RPLP2 SNORA52 PNPLA2 PIDD1 SLC25A22 TSPAN4 POLR2L CHID1 PANO1 CEND1 PDDC1 CRACR2B
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MIR210HG CD151 PTDSS2 MUC6 EPS8L2 DRD4 CDHR5 SCT MUC5AC AP2A2 ANO9 B4GALNT4 PKP3 LMNTD2 SIGIRR PIDD1 MIR210 MUC2 POLR2L PANO1 DEAF1 CEND1 PDDC1 CRACR2B RNH1 MIR6744 LOC143666 LOC171391 LOC101059906 TMEM80 PHRF1 LOC101927503 RPLP2 SNORA52 IRF7 PNPLA2 RASSF7 SLC25A22 TALDO1 MUC5B TSPAN4 HRAS TOLLIP CHID1 LRRC56
dgv1526n54 Chr.11:812533 - 843713 on Build GRCh38 Gain CD151 TSPAN4 POLR2L RPLP2 CRACR2B PNPLA2
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CD151 LOC171391 AP2A2 RPLP2 SNORA52 PNPLA2 PIDD1 SLC25A22 TSPAN4 POLR2L CHID1 PANO1 CEND1 PDDC1 CRACR2B
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MIR210HG CD151 PTDSS2 MUC6 EPS8L2 DRD4 CDHR5 SCT MUC5AC AP2A2 ANO9 LMNTD2 SIGIRR PIDD1 MIR210 MUC2 POLR2L PANO1 DEAF1 CEND1 PDDC1 CRACR2B RNH1 MIR6744 LOC143666 LOC171391 TOLLIP-AS1 LOC101059906 TMEM80 PHRF1 LOC101927503 RPLP2 SNORA52 IRF7 PNPLA2 RASSF7 SLC25A22 TALDO1 MUC5B TSPAN4 HRAS TOLLIP CHID1 LRRC56
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss CD151 PIDD1 TSPAN4 POLR2L CHID1 AP2A2 RPLP2 SNORA52 CRACR2B PNPLA2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion MIR210HG CD151 PTDSS2 EPS8L2 DRD4 CDHR5 SCT AP2A2 ANO9 B4GALNT4 PKP3 LMNTD2 SIGIRR PIDD1 MIR210 POLR2L PANO1 DEAF1 CEND1 PDDC1 CRACR2B RNH1 LOC143666 LOC171391 LOC101059906 TMEM80 PHRF1 RPLP2 SNORA52 IRF7 PNPLA2 RASSF7 SLC25A22 TALDO1 TSPAN4 HRAS CHID1 LRRC56
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CD151 LOC171391 RPLP2 SNORA52 PNPLA2 PIDD1 SLC25A22 TSPAN4 POLR2L CHID1 PANO1 CEND1 PDDC1 CRACR2B
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain CD151 LOC171391 PIDD1 SLC25A22 PANO1 CEND1 PDDC1 RPLP2 SNORA52 CRACR2B PNPLA2
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion MIR210HG CD151 PTDSS2 EPS8L2 DRD4 CDHR5 SCT LMNTD2 PIDD1 MIR210 POLR2L PANO1 DEAF1 CEND1 PDDC1 CRACR2B RNH1 LOC143666 LOC171391 LOC101059906 TMEM80 PHRF1 RPLP2 SNORA52 IRF7 PNPLA2 RASSF7 SLC25A22 TALDO1 TSPAN4 HRAS CHID1 LRRC56
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain CD151 TSPAN4 POLR2L CHID1 CRACR2B PNPLA2
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CD151 LOC171391 RPLP2 SNORA52 PNPLA2 PIDD1 SLC25A22 TALDO1 TSPAN4 POLR2L CHID1 PANO1 CEND1 PDDC1 CRACR2B

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