Hs03918355_cn

• Gene Symbol: ZNF276
• Assay Reference Genome Location: Chr.16:89727104 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 92822
• Gene Name: zinc finger protein 276
• Gene Aliases: CENP-Z, CENPZ, ZADT, ZFP276, ZNF477
• Location: Chr.16:89720368-89740925 on Build GRCh38
• Assay Gene Location: Within Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ZNF276	NM_001113525.1			NP_001106997.1
	NM_152287.3			NP_689500.2
	NR_110122.1
	NR_110126.1
	NR_110128.1
	NR_110129.1
	XM_005256324.3			XP_005256381.1
	XM_005256328.3			XP_005256385.1
	XM_017023889.1			XP_016879378.1
	XM_017023890.1			XP_016879379.1
	AK026482.1
	AK056405.1
	AK289801.1
	AK295770.1
	AK315793.1
	BC032781.1			AAH32781.2
	BC107603.1			AAI07604.1
	BC110348.1			AAI10349.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1931	Chr.16:89713649 - 89746701 on Build GRCh38	Insertion	ZNF276 VPS9D1 FANCA VPS9D1-AS1
nsv952079	Chr.16:89685593 - 89749492 on Build GRCh38	Deletion	ZNF276 VPS9D1 FANCA SPATA2L CDK10 VPS9D1-AS1
nsv573743	Chr.16:89664419 - 89853617 on Build GRCh38	Gain	LOC107984817 SPIRE2 SPATA33 ZNF276 VPS9D1 FANCA SPATA2L CDK10 VPS9D1-AS1 LOC105371419
esv2762221	Chr.16:89610380 - 90039318 on Build GRCh38	Gain+Loss	GAS8-AS1 SPATA33 MC1R CENPBD1 VPS9D1 FANCA CDK10 TUBB3 CHMP1A VPS9D1-AS1 LOC105371419 DEF8 LOC107984817 SPIRE2 AFG3L1P DPEP1 ZNF276 SPATA2L DBNDD1 GAS8 TCF25
nsv428331	Chr.16:89216635 - 90185980 on Build GRCh38	Gain+Loss	GAS8-AS1 SPATA33 FANCA CDK10 CHMP1A LOC107984817 SPIRE2 LOC101927817 SNORD68 RPL13 LOC105371414 GAS8 LOC100287036 CPNE7 TUBB8P7 MC1R URAHP FAM157C CENPBD1 VPS9D1 ANKRD11 TUBB3 SPG7 VPS9D1-AS1 LOC105371419 DEF8 AFG3L1P DPEP1 PRDM7 ZNF276 SPATA2L DBNDD1 ZNF778 TCF25
nsv833331	Chr.16:89726091 - 89849806 on Build GRCh38	Gain+Loss	LOC107984817 SPIRE2 ZNF276 FANCA LOC105371419
nsv833330	Chr.16:89678466 - 89741783 on Build GRCh38	Loss	ZNF276 VPS9D1 FANCA SPATA2L CDK10 VPS9D1-AS1
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	GAS8-AS1 SPATA33 LOC400558 CDK10 CHMP1A LOC107987238 SNAI3-AS1 LOC107984817 SPIRE2 LOC101927817 MIR4722 LOC100129697 LOC105371414 LOC339059 LINC00304 GAS8 LOC100287036 MC1R CBFA2T3 URAHP LOC105371409 FAM157C SLC22A31 GALNS VPS9D1-AS1 CDH15 LOC105371419 DEF8 CTU2 ZNF276 SPATA2L DBNDD1 ZNF778 TCF25 FANCA LOC101927793 LOC100289580 ACSF3 SNORD68 IL17C RPL13 CYBA APRT CDT1 CPNE7 TUBB8P7 CENPBD1 VPS9D1 ANKRD11 TUBB3 PIEZO1 SPG7 RNF166 AFG3L1P DPEP1 PRDM7 PABPN1L SNAI3 TRAPPC2L MVD
nsv509639	Chr.16:89513538 - 89775915 on Build GRCh38	Insertion	SPATA33 VPS9D1 FANCA CDK10 SPG7 CHMP1A VPS9D1-AS1 SNORD68 DPEP1 ZNF276 RPL13 SPATA2L CPNE7

More Information

Additional Information:

For this assay, SNP(s) [rs112341340] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated

Function(s)

DNA binding
protein binding
zinc ion binding