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See other TSC2 CNV Assays ›
Gene Symbol
TSC2
Assay Reference Genome
Location

Chr.16:2070225 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03918866_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
Your Price
Online offer:
4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 7249

Gene Name:

 tuberous sclerosis 2

Gene Aliases:

 LAM, PPP1R160, TSC4

Location:

 Chr.16:2047804-2088720 on Build GRCh38

Assay Gene Location:

 Within Intron 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSC2 NM_000548.4 NP_000539.2
NM_001077183.2 NP_001070651.1
NM_001114382.2 NP_001107854.1
NM_001318827.1 NP_001305756.1
NM_001318829.1 NP_001305758.1
NM_001318831.1 NP_001305760.1
NM_001318832.1 NP_001305761.1
XM_005255529.4 XP_005255586.2
XM_005255531.4 XP_005255588.2
XM_011522636.2 XP_011520938.1
XM_011522637.2 XP_011520939.1
XM_011522638.2 XP_011520940.2
XM_011522639.2 XP_011520941.1
XM_011522640.2 XP_011520942.1
XM_017023615.1 XP_016879104.1
XM_017023616.1 XP_016879105.1
XM_017023617.1 XP_016879106.1
XM_017023618.1 XP_016879107.1
AB210000.1
AK295672.1
AK295728.1
AK299343.1
BC150300.1
BX647816.1 CAI46010.1
KJ534954.1
KJ534955.1
KJ534956.1
KJ534957.1
KJ534958.1
KJ534982.1
KJ534983.1
KJ534984.1
KJ534985.1
KJ535011.1
KJ535022.1
KJ535038.1
KJ535039.1
KJ535051.1
KJ535091.1
KJ535094.1
X75621.1 CAA53287.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication ATP6V0C MSLN C1QTNF8 SNORA64 ARHGDIG C16orf91 PDIA2 CCDC154 CHTF18 MCRIP2 ERVK13-1 TELO2 LOC652276 WDR90 LOC105371049 RHBDF1 MIR3177 NPRL3 HAGHL SSTR5 BAIAP3 AXIN1 DDX11L10 GNPTG SNHG9 WASIR2 LOC105371184 TBC1D24 NDUFB10 MIR6511B1 NOXO1 RHBDL1 RPL3L MIR3176 NPW RPUSD1 ABCA17P LMF1-AS1 JMJD8 CASKIN1 RNPS1 LMF1 NARFL FBXL16 PGP C16orf59 MSRB1 MIR662 WDR24 E4F1 MLST8 CLCN7 LOC101929280 MIR4717 GFER TRAF7 HBA1 RAB40C PKD1 MIR5587 LINC00235 LOC105371046 MIR3178 TMEM204 FAHD1 NME4 SNORA10 LOC106660606 RGS11 MIR6768 MIR6767 CEMP1 WFIKKN1 TPSAB1 LOC100287175 ABCA3 CRAMP1 DECR2 LOC105371047 NUBP2 FLJ42627 ZNF598 CAPN15 SNORA78 SNORD60 RAB11FIP3 POLR3K TPSG1 MEIOB HBQ1 HAGH SSTR5-AS1 MIR6859-4 SOX8 GNG13 SNHG19 SNRNP25 MAPK8IP3 CCDC78 AMDHD2 ECI1 TBL3 FAM234A RNF151 TPSD1 SYNGR3 NME3 IGFALS RHOT2 TSR3 UBE2I BRICD5 MIR1225 SLC9A3R2 LOC105371045 PRSS27 FAM173A LINC00254 HS3ST6 EME2 SPSB3 PRR25 MIR3677 IFT140 PDPK1 UNKL TSC2 MIR3180-5 HN1L HBA2 MIR940 LOC107984876 RPL23AP5 KCTD5 LOC729652 MIR4516 NTHL1 LOC107987233 CACNA1H NTN3 DNASE1L2 TPSB2 HBZ RPS2 LUC7L PTX4 RAB26 LOC100134368 METRN CCNF HBM TMEM8A MRPL28 STUB1 METTL26 PRSS29P MPG MRPS34 PIGQ LOC105371038 PRR35 NHLRC4
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss CASKIN1 ZNF598 MIR3677 RNPS1 SNORD60 TSC2 MIR3180-5 MIR940 PGP MIR4516 NTHL1 E4F1 LOC105371049 MLST8 DNASE1L2 SNHG19 MIR4717 GFER TRAF7 PKD1 ECI1 TBL3 SYNGR3 RAB26 LOC106660606 BRICD5 MIR1225 SLC9A3R2 ABCA3 MIR6511B1 NOXO1 NPW
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion PKD1 TBL3 ZNF598 SNORA78 RNF151 RPS2 SYNGR3 TSC2 SNORA64 SNORA10 SNHG9 MIR1225 SLC9A3R2 MSRB1 MIR4516 NTHL1 HS3ST6 NDUFB10 MIR6511B1 LOC105371049 NOXO1 RPL3L NPW GFER
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion PKD1 TBL3 ZNF598 SNORA78 RNF151 RPS2 SYNGR3 TSC2 SNORA64 SNORA10 SNHG9 MIR1225 SLC9A3R2 NTHL1 NDUFB10 MIR6511B1 LOC105371049 NOXO1 NPW GFER
nsv457349 Chr.16:2055054 - 2200730 on Build GRCh38 Loss PKD1 CASKIN1 MIR4516 SNORD60 TSC2 MIR6511B1 LOC105371049 MIR3180-5 RAB26 SNHG19 MIR1225 TRAF7

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