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See other SEC14L5 CNV Assays ›
Gene Symbol
SEC14L5
Assay Reference Genome
Location

Chr.16:4969071 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03919335_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9717

Gene Name:

 SEC14 like lipid binding 5

Gene Aliases:

 PRELID4B

Location:

 Chr.16:4958317-5019155 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SEC14L5 NM_014692.1 NP_055507.1
AB007880.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3637714 Chr.16:4958035 - 5079276 on Build GRCh38 Gain SEC14L5 NAGPA ALG1 NAGPA-AS1 C16orf89
esv3637713 Chr.16:4957958 - 5307305 on Build GRCh38 Gain SEC14L5 NAGPA ALG1 NAGPA-AS1 RBFOX1 EEF2KMT C16orf89
esv25186 Chr.16:4858500 - 5142800 on Build GRCh38 Gain SEC14L5 PPL NAGPA ALG1 NAGPA-AS1 UBN1 EEF2KMT C16orf89
esv2761893 Chr.16:4941276 - 4995458 on Build GRCh38 Loss SEC14L5
esv2422516 Chr.16:4775920 - 5160979 on Build GRCh38 Deletion SEC14L5 SEPT12 PPL NAGPA ALG1 NAGPA-AS1 ROGDI UBN1 EEF2KMT SMIM22 GLYR1 C16orf89
nsv1046986 Chr.16:4049000 - 5555721 on Build GRCh38 Gain LOC105371063 NAGPA ZNF500 SEC14L5 SRL PPL VASN CDIP1 HMOX2 ADCY9 ROGDI EEF2KMT CORO7-PAM16 CORO7 MIR6769A GLIS2-AS1 C16orf89 GLIS2 NUDT16L1 LINC01569 UBALD1 ALG1 PAM16 NAGPA-AS1 RBFOX1 TFAP4 ANKS3 DNAJA3 MGRN1 GLYR1 SEPT12 C16orf96 NMRAL1 UBN1 SMIM22 C16orf71
nsv1042612 Chr.16:4965694 - 5150514 on Build GRCh38 Loss SEC14L5 NAGPA ALG1 NAGPA-AS1 EEF2KMT C16orf89
nsv457360 Chr.16:4960912 - 5284683 on Build GRCh38 Loss SEC14L5 NAGPA ALG1 NAGPA-AS1 RBFOX1 EEF2KMT C16orf89
nsv528586 Chr.16:4951303 - 5021669 on Build GRCh38 Gain SEC14L5
esv2760069 Chr.16:4922849 - 5374828 on Build GRCh38 Gain+Loss SEC14L5 PPL NAGPA ALG1 NAGPA-AS1 RBFOX1 EEF2KMT C16orf89
esv3892762 Chr.16:4967386 - 5060625 on Build GRCh38 Gain SEC14L5 NAGPA NAGPA-AS1 C16orf89
nsv1039730 Chr.16:4902193 - 4970782 on Build GRCh38 Loss SEC14L5 PPL

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More Information


Additional Information:

For this assay, SNP(s) [rs74005423] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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