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See other ATP2C2 CNV Assays ›
Gene Symbol
ATP2C2
Assay Reference Genome
Location

Chr.16:84406302 on build GRCh38
Cytoband
16q24.1
Assay ID Hs03924479_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9914

Gene Name:

 ATPase secretory pathway Ca2+ transporting 2

Gene Aliases:

 SPCA2

Location:

 Chr.16:84368523-84465777 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP2C2 NM_001286527.2 NP_001273456.2
NM_014861.3 NP_055676.3
XM_011523486.2 XP_011521788.1
AB014603.1 BAA31678.2
AK300526.1
AK316128.1
AY791884.1 AAV54193.1
BX648333.1 CAI46049.1
CR749829.1 CAH18686.1
DB218862.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1061004 Chr.16:84405376 - 84561748 on Build GRCh38 Loss ATP2C2 LOC105371374 TLDC1
nsv1064677 Chr.16:84384525 - 84462657 on Build GRCh38 Loss ATP2C2 LOC105371374
nsv1060813 Chr.16:84406267 - 84430850 on Build GRCh38 Loss ATP2C2
nsv573425 Chr.16:84298994 - 84575953 on Build GRCh38 Loss ATP2C2 WFDC1 LOC105371374 COTL1 TLDC1
esv3892928 Chr.16:84339110 - 84524557 on Build GRCh38 Loss ATP2C2 LOC105371374 TLDC1
dgv169n21 Chr.16:84346305 - 84480735 on Build GRCh38 Loss ATP2C2 LOC105371374 TLDC1
nsv573427 Chr.16:84367244 - 84435705 on Build GRCh38 Loss ATP2C2
nsv471107 Chr.16:84378250 - 84455427 on Build GRCh38 Gain ATP2C2
dgv3057n100 Chr.16:84378422 - 84500091 on Build GRCh38 Loss ATP2C2 LOC105371374 TLDC1
nsv1066356 Chr.16:84401623 - 84438300 on Build GRCh38 Loss ATP2C2
nsv483044 Chr.16:84166395 - 87066394 on Build GRCh38 Gain GSE1 CRISPLD2 COX4I1 WFDC1 LOC101928474 EMC8 LOC440390 LINC01081 C16orf74 FOXC2 MIR1910 MIR6774 DNAAF1 LINC00917 FAM92B ADAD2 FLJ30679 LOC146513 FOXL1 IRF8 LINC01082 LOC105371374 COTL1 TLDC1 FENDRR MIR5093 GINS2 LOC105376777 LOC400548 MTHFSD LOC101928557 KCNG4 TAF1C LOC102724344 ATP2C2 FOXC2-AS1 ZDHHC7 KIAA0513 FOXF1 USP10 KLHL36 LINC00311 LOC101928614
nsv523226 Chr.16:84397270 - 84455427 on Build GRCh38 Loss ATP2C2
dgv5263n54 Chr.16:84403617 - 84435705 on Build GRCh38 Loss ATP2C2
dgv547e214 Chr.16:84253360 - 84417275 on Build GRCh38 Loss ATP2C2 WFDC1 LOC105376777
nsv1059640 Chr.16:84338790 - 84543759 on Build GRCh38 Loss ATP2C2 LOC105371374 TLDC1
dgv5262n54 Chr.16:84381903 - 84583279 on Build GRCh38 Loss ATP2C2 LOC105371374 COTL1 TLDC1
nsv457600 Chr.16:84387654 - 84501190 on Build GRCh38 Loss ATP2C2 LOC105371374 TLDC1
nsv1056072 Chr.16:84397757 - 84451417 on Build GRCh38 Loss ATP2C2

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