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See other TSC2 CNV Assays ›
Gene Symbol
TSC2
Assay Reference Genome
Location

Chr.16:2067946 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03925312_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
Your Price
Online offer:
4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 7249

Gene Name:

 tuberous sclerosis 2

Gene Aliases:

 LAM, PPP1R160, TSC4

Location:

 Chr.16:2047804-2088720 on Build GRCh38

Assay Gene Location:

 Within Intron 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSC2 NM_000548.4 NP_000539.2
NM_001077183.2 NP_001070651.1
NM_001114382.2 NP_001107854.1
NM_001318827.1 NP_001305756.1
NM_001318829.1 NP_001305758.1
NM_001318831.1 NP_001305760.1
NM_001318832.1 NP_001305761.1
XM_005255529.4 XP_005255586.2
XM_005255531.4 XP_005255588.2
XM_011522636.2 XP_011520938.1
XM_011522637.2 XP_011520939.1
XM_011522638.2 XP_011520940.2
XM_011522639.2 XP_011520941.1
XM_011522640.2 XP_011520942.1
XM_017023615.1 XP_016879104.1
XM_017023616.1 XP_016879105.1
XM_017023617.1 XP_016879106.1
XM_017023618.1 XP_016879107.1
AB210000.1
AK295672.1
AK295728.1
AK299343.1
BC150300.1
BX647816.1 CAI46010.1
KJ534954.1
KJ534955.1
KJ534956.1
KJ534957.1
KJ534958.1
KJ534982.1
KJ534983.1
KJ534984.1
KJ534985.1
KJ535011.1
KJ535022.1
KJ535038.1
KJ535039.1
KJ535051.1
KJ535091.1
KJ535094.1
X75621.1 CAA53287.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication UBE2I ABCA17P HAGHL HN1L DNASE1L2 LOC105371184 LOC100287175 MIR940 MPG SPSB3 PRSS27 CCDC78 TELO2 TPSD1 LMF1 TPSG1 MIR6511B1 MEIOB RPS2 TSC2 GFER MIR3677 DDX11L10 NARFL NTHL1 LOC107984876 MIR1225 ERVK13-1 C16orf59 NPW RHBDF1 MSLN LOC106660606 MAPK8IP3 HAGH HS3ST6 TBC1D24 WFIKKN1 NDUFB10 SOX8 TPSB2 NTN3 LOC100134368 PRR25 SNORA64 SNHG9 MIR3178 SNORD60 HBA2 MIR6859-4 GNG13 MLST8 LOC101929280 FAM234A LOC652276 SNORA10 LMF1-AS1 RHOT2 UNKL MIR3176 PGP METRN NUBP2 IFT140 CAPN15 HBM LUC7L SSTR5-AS1 ARHGDIG PKD1 NHLRC4 HBA1 LOC105371045 LINC00235 SSTR5 E4F1 CHTF18 MSRB1 CEMP1 FLJ42627 TPSAB1 MIR662 TRAF7 RNPS1 TBL3 RHBDL1 RAB26 SNHG19 LOC105371049 MIR4717 RGS11 TSR3 ZNF598 ECI1 SNORA78 FAHD1 BRICD5 LOC107987233 RPL23AP5 NPRL3 FAM173A AXIN1 RPL3L LINC00254 LOC105371038 LOC729652 MIR6768 DECR2 LOC105371047 MIR3180-5 PRR35 C1QTNF8 RPUSD1 ATP6V0C CCDC154 TMEM8A NME3 LOC105371046 WASIR2 IGFALS SNRNP25 SLC9A3R2 NOXO1 FBXL16 NME4 MIR4516 C16orf91 TMEM204 GNPTG RAB40C JMJD8 POLR3K MIR5587 MRPL28 HBZ ABCA3 MRPS34 METTL26 WDR24 EME2 MIR6767 CRAMP1 CCNF AMDHD2 PRSS29P MIR3177 KCTD5 PTX4 CLCN7 PDPK1 HBQ1 RAB11FIP3 PDIA2 MCRIP2 CASKIN1 WDR90 SYNGR3 BAIAP3 RNF151 STUB1 PIGQ CACNA1H
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss TRAF7 RNPS1 DNASE1L2 SNORD60 TBL3 MIR940 MLST8 SLC9A3R2 NOXO1 RAB26 MIR4516 SNHG19 MIR6511B1 TSC2 LOC105371049 GFER MIR3677 ABCA3 PGP MIR4717 NTHL1 ZNF598 ECI1 MIR1225 NPW BRICD5 PKD1 E4F1 LOC106660606 CASKIN1 MIR3180-5 SYNGR3
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion NTHL1 SNHG9 ZNF598 MIR1225 SNORA78 TBL3 NPW PKD1 SLC9A3R2 RPL3L NOXO1 SNORA10 HS3ST6 MIR4516 MIR6511B1 MSRB1 SYNGR3 RPS2 NDUFB10 TSC2 LOC105371049 RNF151 GFER SNORA64
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion NTHL1 SNHG9 ZNF598 MIR1225 SNORA78 TBL3 NPW PKD1 SLC9A3R2 NOXO1 SNORA10 MIR6511B1 SYNGR3 RPS2 NDUFB10 TSC2 LOC105371049 RNF151 GFER SNORA64
nsv457349 Chr.16:2055054 - 2200730 on Build GRCh38 Loss RAB26 MIR4516 SNHG19 TRAF7 MIR6511B1 MIR1225 CASKIN1 SNORD60 MIR3180-5 TSC2 LOC105371049 PKD1

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