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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2040944 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03929592_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 NP_001305122.1
NM_001318194.1 NP_001305123.1
NM_002528.6 NP_002519.1
XM_017023253.1 XP_016878742.1
AB001575.1 BAA19413.1
BC000391.2 AAH00391.2
BC003014.1 AAH03014.1
BE900738.1
BG468617.1
U79718.1 AAB41534.1
U81285.1 AAC51136.1
Y09687.1 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TBC1D24 NOXO1 TMEM8A METTL26 JMJD8 PKD1 LOC107984876 CCDC154 PTX4 HN1L UBE2I C16orf91 PDIA2 MCRIP2 GNPTG AMDHD2 GNG13 LINC00254 LOC105371038 LUC7L SNORD60 IFT140 FAM234A SNORA10 NME4 AXIN1 PRSS27 MIR1225 CCNF HBA2 NHLRC4 EME2 DNASE1L2 STUB1 SNHG19 GFER MIR3177 LOC105371047 LOC652276 PDPK1 WDR24 SOX8 HBM SYNGR3 NTHL1 MIR4717 RHBDF1 HBZ MSRB1 RAB11FIP3 ABCA17P FAHD1 MIR3677 POLR3K MRPS34 FBXL16 ZNF598 HBQ1 NME3 PRR25 FLJ42627 PRSS29P RPUSD1 ABCA3 METRN MIR4516 LOC106660606 CASKIN1 BAIAP3 SPSB3 LOC105371184 LOC101929280 MPG FAM173A HAGHL WASIR2 RPL3L RAB26 MIR3180-5 CCDC78 ERVK13-1 ARHGDIG MRPL28 RAB40C NTN3 LOC100287175 SNORA78 HS3ST6 TPSB2 HAGH SNORA64 TSR3 LOC105371049 TSC2 SNRNP25 BRICD5 TBL3 NARFL MIR3176 TMEM204 WDR90 LOC729652 SSTR5 CEMP1 MAPK8IP3 NUBP2 TPSG1 RNF151 LMF1-AS1 RPL23AP5 CACNA1H ATP6V0C LOC107987233 MEIOB LOC100134368 MLST8 LMF1 NDUFB10 TELO2 LOC105371045 MIR3178 MIR6768 C16orf59 C1QTNF8 SNHG9 DECR2 MIR6511B1 SSTR5-AS1 PRR35 PIGQ MIR940 MIR6767 PGP MIR662 LINC00235 UNKL MIR6859-4 NPW TPSD1 MIR5587 IGFALS CAPN15 SLC9A3R2 CLCN7 RHBDL1 WFIKKN1 LOC105371046 DDX11L10 RPS2 ECI1 CHTF18 TPSAB1 KCTD5 RHOT2 MSLN RNPS1 TRAF7 NPRL3 RGS11 E4F1 HBA1 CRAMP1
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss NOXO1 GFER SYNGR3 TBL3 NTHL1 SLC9A3R2 ZNF598 TSC2 NPW
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion RPL3L NOXO1 MIR1225 SYNGR3 TBL3 NTHL1 SLC9A3R2 PKD1 SNHG9 RPS2 MSRB1 MIR4516 MIR6511B1 RNF151 GFER SNORA78 HS3ST6 SNORA64 ZNF598 LOC105371049 TSC2 NDUFB10 NPW SNORA10
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion NOXO1 MIR1225 SYNGR3 TBL3 NTHL1 SLC9A3R2 PKD1 SNHG9 RPS2 MIR6511B1 RNF151 GFER SNORA78 SNORA64 ZNF598 LOC105371049 TSC2 NDUFB10 NPW SNORA10

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