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See other TSC2 CNV Assays ›
Gene Symbol
TSC2
Assay Reference Genome
Location

Chr.16:2064600 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03930753_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
Your Price
Online offer:
4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 7249

Gene Name:

 tuberous sclerosis 2

Gene Aliases:

 LAM, PPP1R160, TSC4

Location:

 Chr.16:2047804-2088720 on Build GRCh38

Assay Gene Location:

 Within Intron 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSC2 NM_000548.4 NP_000539.2
NM_001077183.2 NP_001070651.1
NM_001114382.2 NP_001107854.1
NM_001318827.1 NP_001305756.1
NM_001318829.1 NP_001305758.1
NM_001318831.1 NP_001305760.1
NM_001318832.1 NP_001305761.1
XM_005255529.4 XP_005255586.2
XM_005255531.4 XP_005255588.2
XM_011522636.2 XP_011520938.1
XM_011522637.2 XP_011520939.1
XM_011522638.2 XP_011520940.2
XM_011522639.2 XP_011520941.1
XM_011522640.2 XP_011520942.1
XM_017023615.1 XP_016879104.1
XM_017023616.1 XP_016879105.1
XM_017023617.1 XP_016879106.1
XM_017023618.1 XP_016879107.1
AB210000.1
AK022401.1 1 1288
AK295672.1
AK295728.1
AK299343.1
BC150300.1
BX647816.1 CAI46010.1
KJ534954.1
KJ534955.1
KJ534956.1
KJ534957.1
KJ534958.1
KJ534982.1
KJ534983.1
KJ534984.1
KJ534985.1
KJ535011.1
KJ535022.1
KJ535038.1
KJ535039.1
KJ535051.1
KJ535091.1
KJ535094.1
X75621.1 CAA53287.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication STUB1 NME4 DDX11L10 ZNF598 SNORD60 FBXL16 LOC729652 LMF1 MAPK8IP3 TSR3 HBZ NME3 PDPK1 CCNF LOC107987233 UBE2I PKD1 SOX8 AMDHD2 MSLN FAHD1 LMF1-AS1 LOC100134368 WASIR2 CASKIN1 HN1L GNG13 MRPS34 TPSB2 RPL23AP5 TSC2 SNORA64 RGS11 TELO2 RAB26 MIR6767 C1QTNF8 UNKL MPG NPRL3 FLJ42627 LINC00235 TPSG1 MRPL28 LOC105371047 ECI1 HAGHL NUBP2 C16orf59 ERVK13-1 METTL26 RNPS1 TMEM204 NARFL MIR3677 CEMP1 PRSS29P LUC7L TBL3 MIR6511B1 CACNA1H ARHGDIG MIR940 PRR35 SSTR5-AS1 IGFALS MEIOB SNORA78 SNRNP25 CCDC154 SNHG19 SPSB3 MIR4717 MCRIP2 NTN3 MIR6768 TPSD1 ABCA17P HS3ST6 RAB40C DECR2 RPS2 LOC105371049 HAGH MIR3178 FAM173A TBC1D24 METRN PRSS27 MIR3176 FAM234A LINC00254 IFT140 EME2 RPL3L LOC105371046 MIR4516 NOXO1 AXIN1 DNASE1L2 LOC105371038 HBA2 NHLRC4 CLCN7 GNPTG ABCA3 CCDC78 MIR3177 MIR1225 SNHG9 HBQ1 PDIA2 MIR662 PGP RHBDL1 NDUFB10 PRR25 TPSAB1 WFIKKN1 LOC101929280 C16orf91 WDR90 LOC652276 CAPN15 GFER RHOT2 KCTD5 MIR3180-5 SYNGR3 CHTF18 SSTR5 ATP6V0C NTHL1 LOC107984876 POLR3K LOC100287175 BRICD5 HBM MIR6859-4 MIR5587 JMJD8 PIGQ PTX4 RPUSD1 TRAF7 NPW HBA1 TMEM8A RNF151 BAIAP3 E4F1 RAB11FIP3 SNORA10 LOC105371045 RHBDF1 MSRB1 WDR24 LOC105371184 MLST8 SLC9A3R2 CRAMP1 LOC106660606
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss MIR3180-5 SYNGR3 ECI1 ZNF598 SNORD60 NTHL1 RNPS1 BRICD5 MIR3677 PKD1 TRAF7 NPW MIR4516 NOXO1 TBL3 DNASE1L2 CASKIN1 MIR6511B1 ABCA3 MIR940 MIR1225 E4F1 TSC2 SNHG19 MIR4717 PGP RAB26 MLST8 SLC9A3R2 GFER LOC106660606 LOC105371049
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion MIR6511B1 SYNGR3 ZNF598 NTHL1 RNF151 SNORA78 MIR1225 SNHG9 TSC2 SNORA10 SNORA64 PKD1 MSRB1 NDUFB10 RPL3L NPW HS3ST6 SLC9A3R2 MIR4516 NOXO1 TBL3 RPS2 GFER LOC105371049
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion MIR6511B1 SYNGR3 ZNF598 NTHL1 RNF151 SNORA78 MIR1225 SNHG9 TSC2 SNORA10 SNORA64 PKD1 NDUFB10 NPW SLC9A3R2 NOXO1 TBL3 RPS2 GFER LOC105371049
nsv457349 Chr.16:2055054 - 2200730 on Build GRCh38 Loss SNHG19 CASKIN1 MIR6511B1 MIR3180-5 PKD1 SNORD60 RAB26 TRAF7 MIR1225 MIR4516 TSC2 LOC105371049

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