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See other SLC9A3R2 CNV Assays ›
Gene Symbol
SLC9A3R2
Assay Reference Genome
Location

Chr.16:2034239 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03931957_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9351

Gene Name:

 SLC9A3 regulator 2

Gene Aliases:

 E3KARP, NHE3RF2, NHERF-2, NHERF2, OCTS2, SIP-1, SIP1, TKA-1

Location:

 Chr.16:2026868-2039026 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC9A3R2 NM_001130012.2 NP_001123484.1
NM_001252073.1 NP_001239002.1
NM_001252075.1 NP_001239004.1
NM_001252076.1 NP_001239005.1
NM_004785.5 NP_004776.3
XM_005255702.4 XP_005255759.1
XM_006720981.1 1 575 XP_006721044.1
XM_017023894.1 XP_016879383.1
XM_017023895.1 XP_016879384.1
AF004900.1 AAC63061.1
AF035771.1 AAC52090.1
BC014513.1 AAH14513.2
BC069014.1 AAH69014.1
BC106001.1 AAI06002.1
BQ687174.1
BX377861.2
CB961565.1
DB495688.2
U82108.1 AAB53042.1
Z50150.1 CAA90511.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MSRB1 FAM234A LUC7L ZNF598 CAPN15 METTL26 RPL3L HS3ST6 HAGHL KCTD5 HN1L RPS2 LOC107987233 WDR24 NPRL3 METRN LOC105371045 STUB1 NDUFB10 TBC1D24 TPSB2 RPL23AP5 MIR940 UBE2I MCRIP2 ARHGDIG EME2 CLCN7 LOC101929280 LOC729652 GNPTG MIR4516 BRICD5 LOC105371046 HBA1 C1QTNF8 RPUSD1 NTN3 AXIN1 FBXL16 LINC00254 CCDC154 MSLN RNPS1 MRPS34 PTX4 PKD1 TMEM204 FAHD1 MIR6859-4 WDR90 NOXO1 FLJ42627 MIR3178 LOC105371184 RAB40C CCDC78 TELO2 LMF1-AS1 SOX8 HBM MIR3177 WASIR2 PIGQ MLST8 NPW BAIAP3 WFIKKN1 PGP MEIOB TMEM8A SNHG19 PDPK1 RNF151 MAPK8IP3 DECR2 MIR1225 RHOT2 HBZ NME3 PRSS29P PDIA2 SNORA78 LOC105371049 CCNF JMJD8 ERVK13-1 TPSAB1 LOC106660606 TRAF7 CEMP1 LOC107984876 C16orf91 POLR3K LOC100134368 MIR6768 NARFL PRR35 MRPL28 IGFALS GNG13 PRSS27 MIR4717 HBA2 TBL3 SSTR5 MIR6767 TPSG1 RHBDL1 SNRNP25 NHLRC4 ATP6V0C CACNA1H SNORA10 MIR5587 LMF1 SPSB3 MIR6511B1 SLC9A3R2 CRAMP1 GFER TSC2 SYNGR3 HAGH NME4 LOC100287175 ECI1 E4F1 NTHL1 TSR3 RAB11FIP3 RAB26 HBQ1 LOC652276 MIR3176 AMDHD2 MIR3677 NUBP2 ABCA3 DNASE1L2 CHTF18 FAM173A LOC105371047 RGS11 MPG SSTR5-AS1 SNHG9 IFT140 RHBDF1 TPSD1 LINC00235 MIR662 C16orf59 CASKIN1 MIR3180-5 SNORD60 SNORA64 LOC105371038 UNKL ABCA17P DDX11L10 PRR25
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss NPW ZNF598 NOXO1 NTHL1 SLC9A3R2 TBL3 GFER TSC2 SYNGR3
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion NPW LOC105371049 MSRB1 ZNF598 SNHG9 NOXO1 NTHL1 MIR4516 RPL3L TBL3 HS3ST6 RNF151 RPS2 MIR1225 SNORA64 SNORA10 NDUFB10 SNORA78 MIR6511B1 SLC9A3R2 PKD1 GFER TSC2 SYNGR3
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss NPW ZNF598 SNHG9 NOXO1 TBL3 RNF151 RPS2 SNORA64 SNORA10 NDUFB10 SNORA78 SLC9A3R2 GFER SYNGR3
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion NPW LOC105371049 ZNF598 SNHG9 NOXO1 NTHL1 TBL3 RNF151 RPS2 MIR1225 SNORA64 SNORA10 NDUFB10 SNORA78 MIR6511B1 SLC9A3R2 PKD1 GFER TSC2 SYNGR3
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss NPW ZNF598 SNHG9 NOXO1 SNORA78 SLC9A3R2 TBL3 RNF151 GFER SYNGR3
nsv457348 Chr.16:2004154 - 2037561 on Build GRCh38 Loss NPW ZNF598 SLC9A3R2

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