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See other SLC9A3R2 CNV Assays ›
Gene Symbol
SLC9A3R2
Assay Reference Genome
Location

Chr.16:2034239 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03931957_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9351

Gene Name:

 SLC9A3 regulator 2

Gene Aliases:

 E3KARP, NHE3RF2, NHERF-2, NHERF2, OCTS2, SIP-1, SIP1, TKA-1

Location:

 Chr.16:2026868-2039026 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC9A3R2 NM_001130012.2 NP_001123484.1
NM_001252073.1 NP_001239002.1
NM_001252075.1 NP_001239004.1
NM_001252076.1 NP_001239005.1
NM_004785.5 NP_004776.3
XM_005255702.4 XP_005255759.1
XM_006720981.1 1 575 XP_006721044.1
XM_017023894.1 XP_016879383.1
XM_017023895.1 XP_016879384.1
AF004900.1 AAC63061.1
AF035771.1 AAC52090.1
BC014513.1 AAH14513.2
BC069014.1 AAH69014.1
BC106001.1 AAI06002.1
BQ687174.1
BX377861.2
CB961565.1
DB495688.2
U82108.1 AAB53042.1
Z50150.1 CAA90511.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication NTHL1 SPSB3 MIR6767 METTL26 SNORD60 DECR2 TSC2 MIR6511B1 MIR5587 NHLRC4 UNKL SYNGR3 PTX4 HS3ST6 LOC106660606 LOC100134368 LOC652276 LOC729652 GNPTG BRICD5 E4F1 POLR3K GFER FAM234A LOC105371046 PRR35 MSLN CCDC78 MIR940 NTN3 PRR25 HBQ1 CHTF18 GNG13 SNORA10 SLC9A3R2 PKD1 RHOT2 LINC00254 DNASE1L2 TPSAB1 RPS2 MIR3178 SOX8 WASIR2 RHBDF1 PRSS29P PGP CACNA1H RAB11FIP3 MCRIP2 HBA2 LOC105371184 TELO2 RAB26 NPRL3 LOC100287175 TMEM204 TPSB2 AMDHD2 C16orf59 RGS11 MIR6768 LOC101929280 ZNF598 NPW NME4 HN1L MIR4717 BAIAP3 JMJD8 TRAF7 UBE2I TPSG1 TMEM8A CASKIN1 RNF151 ECI1 NME3 CEMP1 ABCA17P SSTR5-AS1 HBZ SNORA78 MLST8 FLJ42627 PIGQ FBXL16 RPUSD1 MSRB1 CCNF LOC107984876 LINC00235 RPL23AP5 NARFL CRAMP1 SNORA64 CCDC154 FAHD1 MEIOB DDX11L10 RHBDL1 MIR3180-5 LUC7L IGFALS NOXO1 TBC1D24 RNPS1 C16orf91 PDIA2 LMF1 TBL3 PRSS27 TSR3 HAGHL PDPK1 NDUFB10 WDR90 MIR4516 ARHGDIG TPSD1 CAPN15 SSTR5 IFT140 MRPL28 LOC105371038 MIR3677 ERVK13-1 SNHG19 EME2 MRPS34 C1QTNF8 SNRNP25 RAB40C LOC105371047 MIR1225 AXIN1 WDR24 RPL3L MPG SNHG9 HAGH LOC105371049 FAM173A MIR3176 HBA1 METRN MAPK8IP3 ABCA3 LOC107987233 LOC105371045 MIR3177 ATP6V0C STUB1 NUBP2 HBM KCTD5 LMF1-AS1 MIR6859-4 CLCN7 MIR662 WFIKKN1
nsv521569 Chr.16:1971892 - 2035996 on Build GRCh38 Loss SYNGR3 GFER SLC9A3R2 ZNF598 NPW TBL3 NOXO1
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss SNORA78 RPS2 GFER ZNF598 NPW TBL3 NDUFB10 SNORA64 SYNGR3 SNHG9 SNORA10 SLC9A3R2 RNF151 NOXO1
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion NTHL1 SNORA78 RPS2 GFER ZNF598 TSC2 NPW MSRB1 TBL3 MIR1225 NDUFB10 MIR6511B1 SNORA64 MIR4516 SYNGR3 RPL3L SNHG9 SNORA10 SLC9A3R2 LOC105371049 HS3ST6 PKD1 RNF151 NOXO1
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion NTHL1 SNORA78 RPS2 GFER ZNF598 TSC2 NPW TBL3 MIR1225 NDUFB10 MIR6511B1 SNORA64 SYNGR3 SNHG9 SNORA10 SLC9A3R2 LOC105371049 PKD1 RNF151 NOXO1
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss SYNGR3 SNHG9 SNORA78 GFER SLC9A3R2 ZNF598 NPW TBL3 RNF151 NOXO1
nsv571189 Chr.16:2004154 - 2037561 on Build GRCh38 Loss SLC9A3R2 ZNF598 NPW

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