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See other CRAMP1 CNV Assays ›
Gene Symbol
CRAMP1
Assay Reference Genome
Location

Chr.16:1627692 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03932277_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57585

Gene Name:

 cramped chromatin regulator homolog 1

Gene Aliases:

 CRAMP1L, HN1L, TCE4

Location:

 Chr.16:1614640-1677908 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CRAMP1 NM_020825.3 NP_065876.3
BC137172.1
BC137173.1
BE048705.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss IFT140 CRAMP1 IGFALS MIR3177 EME2 HAGH LOC105371046 MRPS34 SPSB3 NME3 NUBP2 HN1L MAPK8IP3
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SNHG9 UNKL LOC652276 NHLRC4 NPW C16orf91 MIR1225 EME2 LOC105371038 LOC107984876 TPSAB1 NTHL1 KCTD5 DNASE1L2 SSTR5-AS1 TMEM204 NUBP2 HBA1 NPRL3 JMJD8 FLJ42627 WFIKKN1 ZNF598 PIGQ MLST8 RPL3L MIR3180-5 IGFALS C16orf59 HAGH HBM HBA2 FAM173A DECR2 ARHGDIG RPL23AP5 CCNF HBQ1 SSTR5 AMDHD2 LUC7L WDR24 RGS11 SNRNP25 NARFL TSC2 ECI1 MIR4516 NTN3 TBL3 WASIR2 MIR3677 LOC100287175 RPUSD1 NOXO1 MCRIP2 SNORA64 MIR6768 MIR662 CASKIN1 STUB1 SYNGR3 METTL26 RAB11FIP3 RPS2 CRAMP1 BAIAP3 SNORD60 PDPK1 MPG PRR25 HS3ST6 RAB40C PGP LOC729652 CCDC78 LINC00254 SNORA78 SPSB3 E4F1 MSLN LOC101929280 MIR4717 TSR3 FBXL16 MAPK8IP3 ABCA17P CLCN7 GNPTG RAB26 CHTF18 PRSS29P NME4 MIR3177 TMEM8A HBZ BRICD5 LOC106660606 LOC105371049 SOX8 MIR3178 PDIA2 NDUFB10 HN1L FAM234A IFT140 ERVK13-1 TELO2 SNORA10 HAGHL MRPL28 MIR6511B1 LOC105371184 FAHD1 MIR940 TBC1D24 MIR6767 MIR6859-4 C1QTNF8 PTX4 GNG13 TPSB2 METRN CCDC154 CEMP1 GFER CAPN15 PRSS27 RHBDL1 WDR90 LOC100134368 MSRB1 MIR5587 DDX11L10 RNF151 LOC105371046 LINC00235 POLR3K MRPS34 MEIOB TRAF7 LOC105371047 PRR35 RHBDF1 TPSG1 NME3 TPSD1 LMF1 MIR3176 PKD1 ABCA3 CACNA1H UBE2I SLC9A3R2 LOC107987233 AXIN1 ATP6V0C RNPS1 LMF1-AS1 SNHG19 RHOT2 LOC105371045
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss IFT140 TELO2 CRAMP1 IGFALS MIR3177 FAHD1 EME2 HAGH LOC105371046 MRPS34 MEIOB SPSB3 LOC105371047 NME3 TMEM204 NUBP2 HN1L MAPK8IP3
dgv4855n54 Chr.16:1577507 - 1694025 on Build GRCh38 Loss IFT140 LOC105371046 CRAMP1 HN1L
nsv428317 Chr.16:1550716 - 1711581 on Build GRCh38 Gain IFT140 LOC105371046 CRAMP1 TMEM204 HN1L MAPK8IP3
nsv827496 Chr.16:1589777 - 1638333 on Build GRCh38 Gain IFT140 LOC105371046 CRAMP1

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)


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