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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2040503 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03935489_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 NP_001305122.1
NM_001318194.1 NP_001305123.1
NM_002528.6 NP_002519.1
XM_017023253.1 XP_016878742.1
AB001575.1 BAA19413.1
BC000391.2 AAH00391.2
BC003014.1 AAH03014.1
BE900738.1
BG468617.1
U79718.1 AAB41534.1
U81285.1 AAC51136.1
Y09687.1 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication NPRL3 LINC00235 C16orf91 TBC1D24 TMEM204 MIR3177 SNORD60 NDUFB10 HN1L RPL23AP5 RAB26 TSC2 BRICD5 NARFL DECR2 CEMP1 LOC652276 LOC729652 TPSB2 ERVK13-1 RAB40C PIGQ CASKIN1 TSR3 WDR24 SYNGR3 WFIKKN1 PGP NPW LOC100287175 NME4 NHLRC4 RPS2 SLC9A3R2 WDR90 METTL26 NTHL1 CCNF METRN PRR25 AMDHD2 MIR3180-5 RPL3L TPSD1 PDIA2 LMF1 HS3ST6 ATP6V0C EME2 MEIOB UBE2I RNF151 DDX11L10 MIR5587 RGS11 CCDC154 ECI1 POLR3K CRAMP1 DNASE1L2 LOC107984876 CAPN15 E4F1 MIR940 LOC107987233 MIR3176 SSTR5-AS1 TELO2 SNHG9 LMF1-AS1 MPG MIR662 GFER IFT140 UNKL RAB11FIP3 PKD1 MIR6768 MIR4717 FBXL16 TMEM8A LOC105371038 C1QTNF8 NOXO1 ABCA17P FLJ42627 SNORA78 ABCA3 LINC00254 LOC106660606 LOC105371046 ARHGDIG STUB1 HBA2 MLST8 LOC105371049 SNORA64 CLCN7 MIR4516 LOC105371184 HBZ GNPTG LUC7L PTX4 RHBDL1 RNPS1 MIR3677 MAPK8IP3 RPUSD1 MIR1225 KCTD5 LOC105371047 SOX8 LOC100134368 GNG13 IGFALS SNRNP25 ZNF598 WASIR2 PRSS27 MIR6767 SPSB3 FAHD1 TPSAB1 MRPS34 MRPL28 NUBP2 CACNA1H RHBDF1 HAGHL PRR35 RHOT2 LOC101929280 SNORA10 MCRIP2 HAGH MSRB1 NME3 BAIAP3 CHTF18 C16orf59 TBL3 MIR6859-4 HBA1 TPSG1 TRAF7 MIR3178 PRSS29P SSTR5 HBQ1 AXIN1 SNHG19 CCDC78 LOC105371045 FAM173A NTN3 MSLN PDPK1 JMJD8 FAM234A HBM MIR6511B1
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss TBL3 SYNGR3 GFER SLC9A3R2 NPW ZNF598 NOXO1 NTHL1 TSC2
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion MIR4516 TBL3 HS3ST6 SYNGR3 NDUFB10 NPW NOXO1 TSC2 RNF151 SNHG9 MIR1225 SNORA78 GFER RPS2 SLC9A3R2 ZNF598 SNORA10 LOC105371049 NTHL1 SNORA64 PKD1 RPL3L MSRB1 MIR6511B1
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion TBL3 SYNGR3 NDUFB10 NPW NOXO1 TSC2 RNF151 SNHG9 MIR1225 SNORA78 GFER RPS2 SLC9A3R2 ZNF598 SNORA10 LOC105371049 NTHL1 SNORA64 PKD1 MIR6511B1

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