accessibility menu, dialog, popup

UserName
Viewing profile as user:

Please enter the information below and press OK to send your cart to Core Services for purchase.

    

System Message

OKCancel
LOADING ...
See other LOC105371049 CNV Assays ›
Gene Symbol
LOC105371049
Assay Reference Genome
Location

Chr.16:2092011 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03936202_cn
Size
Availability Made To Order
Catalog # 4400291
Price
Your Price
Online offer:
Check your price ›

Assay Details

Target Gene Details

Entrez Gene ID:

 105371049

Gene Name:

 uncharacterized LOC105371049

Gene Aliases:

 -

Location:

 Chr.16:2091436-2095017 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC105371049 NR_135175.1
BM824397.1

Target Gene Details

Entrez Gene ID:

 5310

Gene Name:

 polycystin 1, transient receptor potential channel interacting

Gene Aliases:

 PBP, Pc-1, TRPP1

Location:

 Chr.16:2088708-2135898 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 45 - Exon 45
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PKD1 NM_000296.3 NP_000287.3
NM_001009944.2 NP_001009944.2
XM_005255370.3 XP_005255427.1
XM_011522528.2 XP_011520830.1
XM_011522529.2 XP_011520831.1
XM_011522530.2 XP_011520832.1
XM_011522532.2 XP_011520834.1
XM_011522534.2 XP_011520836.1
XM_011522535.2 XP_011520837.1
XM_011522537.2 XP_011520839.1
XM_017023285.1 XP_016878774.1
AB209025.1 BAD92262.1
AB209675.1 BAD92912.1
L33243.1 AAC37576.1
U24497.1 AAC50128.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4862n54 Chr.16:2088868 - 2095128 on Build GRCh38 Loss LOC105371049 MIR1225 PKD1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication FAHD1 LMF1-AS1 RAB40C NUBP2 CAPN15 CCDC154 PTX4 MIR3178 E4F1 CACNA1H PGP RHBDL1 UBE2I ABCA3 WASIR2 BRICD5 EME2 RPL23AP5 NPW MRPS34 FBXL16 MIR4516 MCRIP2 MIR1225 FLJ42627 HS3ST6 STUB1 TPSG1 SNRNP25 RPUSD1 IGFALS RPS2 PKD1 HBQ1 PRR35 SNHG19 GNG13 CCNF LOC106660606 MEIOB LINC00235 TPSB2 GNPTG MIR6511B1 PDIA2 MIR6767 TSR3 CRAMP1 HAGH LOC100134368 LOC101929280 NOXO1 RAB26 NTHL1 MIR662 RPL3L WDR24 AMDHD2 JMJD8 ATP6V0C MIR6859-4 FAM173A UNKL LOC105371049 PIGQ MAPK8IP3 SNORA10 ARHGDIG KCTD5 HAGHL LUC7L TBC1D24 NPRL3 GFER HBA1 FAM234A NME3 MIR3176 TPSAB1 MSRB1 TRAF7 TMEM204 SSTR5-AS1 MIR6768 CHTF18 WDR90 PRSS27 SNORA64 LOC100287175 MIR5587 MRPL28 LINC00254 TELO2 SOX8 WFIKKN1 LOC652276 MIR3177 MIR4717 NARFL RHBDF1 SPSB3 MIR3180-5 LOC107987233 LOC105371184 RHOT2 MPG PDPK1 LOC105371038 SLC9A3R2 CCDC78 C1QTNF8 DNASE1L2 TBL3 DECR2 ECI1 LOC107984876 MIR3677 LOC105371045 PRR25 POLR3K HBM C16orf59 TPSD1 NDUFB10 SNORA78 CLCN7 NTN3 CEMP1 MIR940 ZNF598 SNHG9 RAB11FIP3 RNF151 CASKIN1 IFT140 METTL26 NME4 BAIAP3 SNORD60 ERVK13-1 SSTR5 RNPS1 LMF1 HN1L TSC2 DDX11L10 MSLN C16orf91 PRSS29P ABCA17P HBA2 NHLRC4 TMEM8A METRN SYNGR3 HBZ AXIN1 LOC729652 RGS11 MLST8 LOC105371046 LOC105371047
dgv4859n54 Chr.16:1971892 - 2264400 on Build GRCh38 Loss MIR6511B1 E4F1 ZNF598 NOXO1 RAB26 NTHL1 PGP CASKIN1 BRICD5 MIR3180-5 SNORD60 NPW LOC105371049 RNPS1 MIR4516 TSC2 MIR1225 SLC9A3R2 DNASE1L2 TBL3 ECI1 PKD1 SYNGR3 GFER MLST8 TRAF7 SNHG19
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion NDUFB10 LOC105371049 SNORA78 MIR6511B1 MIR4516 TSC2 MIR1225 SNORA64 SNORA10 SLC9A3R2 HS3ST6 ZNF598 NOXO1 SNHG9 TBL3 NTHL1 RPS2 RNF151 RPL3L PKD1 SYNGR3 GFER MSRB1 NPW
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion NDUFB10 LOC105371049 SNORA78 MIR6511B1 TSC2 MIR1225 SNORA64 SNORA10 SLC9A3R2 ZNF598 NOXO1 SNHG9 TBL3 NTHL1 RPS2 RNF151 PKD1 SYNGR3 GFER NPW
dgv4861n54 Chr.16:2083900 - 2246850 on Build GRCh38 Loss LOC105371049 MIR6511B1 MIR4516 TSC2 MIR1225 E4F1 DNASE1L2 RAB26 ECI1 PGP CASKIN1 PKD1 MLST8 BRICD5 MIR3180-5 SNORD60 TRAF7 SNHG19
nsv571190 Chr.16:2055054 - 2200730 on Build GRCh38 Loss RAB26 LOC105371049 MIR6511B1 MIR4516 TSC2 CASKIN1 MIR1225 PKD1 MIR3180-5 SNORD60 TRAF7 SNHG19
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain CCNF LOC106660606 MIR6768 MIR6511B1 MIR6767 NTN3 CEMP1 MIR940 MIR3178 E4F1 RAB26 PGP CASKIN1 LOC652276 MIR4717 AMDHD2 ABCA3 BRICD5 MIR3180-5 ATP6V0C SNORD60 LOC105371049 PDPK1 RNPS1 MIR4516 TSC2 MIR1225 ABCA17P DNASE1L2 ECI1 TBC1D24 PKD1 MIR3677 LOC729652 MLST8 C16orf59 TRAF7 SNHG19
nsv471381 Chr.16:2088710 - 2135898 on Build GRCh38 Gain LOC105371049 MIR6511B1 MIR4516 TSC2 MIR1225 PKD1
esv26918 Chr.16:2091142 - 2123135 on Build GRCh38 Gain+Loss LOC105371049 MIR6511B1 PKD1

Back To Top

More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Function(s) Process(es)


Back To Top

Related Products