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See other TSC2 CNV Assays ›
Gene Symbol
TSC2
Assay Reference Genome
Location

Chr.16:2056572 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03936291_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 7249

Gene Name:

 tuberous sclerosis 2

Gene Aliases:

 LAM, PPP1R160, TSC4

Location:

 Chr.16:2047804-2088720 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSC2 NM_000548.4 NP_000539.2
NM_001077183.2 NP_001070651.1
NM_001114382.2 NP_001107854.1
NM_001318827.1 NP_001305756.1
NM_001318829.1 NP_001305758.1
NM_001318831.1 NP_001305760.1
NM_001318832.1 NP_001305761.1
XM_005255529.4 XP_005255586.2
XM_005255531.4 XP_005255588.2
XM_011522636.2 XP_011520938.1
XM_011522637.2 XP_011520939.1
XM_011522638.2 XP_011520940.2
XM_011522639.2 XP_011520941.1
XM_011522640.2 XP_011520942.1
XM_017023615.1 XP_016879104.1
XM_017023616.1 XP_016879105.1
XM_017023617.1 XP_016879106.1
XM_017023618.1 XP_016879107.1
AB210000.1
AK295672.1
AK295728.1
AK299343.1
BC150300.1
BF194994.1
BX647816.1 CAI46010.1
KJ534954.1
KJ534955.1
KJ534956.1
KJ534957.1
KJ534958.1
KJ534982.1
KJ534983.1
KJ534984.1
KJ534985.1
KJ535011.1
KJ535022.1
KJ535038.1
KJ535039.1
KJ535051.1
KJ535091.1
KJ535094.1
X75621.1 CAA53287.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SNORD60 PGP MIR1225 WDR90 MIR6767 BAIAP3 RAB11FIP3 MIR3180-5 KCTD5 LINC00254 LOC106660606 RPUSD1 WDR24 HBZ FAM173A TPSD1 CACNA1H HN1L MIR6859-4 LOC101929280 TMEM204 TPSG1 METTL26 JMJD8 CASKIN1 LOC100134368 NME3 MSLN C16orf91 NPRL3 AMDHD2 ARHGDIG HBA1 TMEM8A WFIKKN1 MPG CCNF PTX4 RNF151 HBQ1 MEIOB ZNF598 NTHL1 RPS2 WASIR2 GNPTG CCDC78 IFT140 PDPK1 NHLRC4 RHOT2 SOX8 MIR662 MIR4717 MAPK8IP3 LOC107984876 LOC729652 LINC00235 LMF1-AS1 SSTR5 LUC7L NARFL C1QTNF8 NPW HAGH MIR3177 ATP6V0C GFER SNHG9 FBXL16 RPL3L NUBP2 AXIN1 LOC100287175 MIR5587 POLR3K RAB40C LOC107987233 PRSS29P CAPN15 NME4 PRR25 DDX11L10 PKD1 ECI1 HS3ST6 MIR940 LOC105371049 SYNGR3 LOC105371046 SNRNP25 SNORA64 BRICD5 TBL3 EME2 RGS11 RNPS1 TSC2 SPSB3 HBA2 UNKL RHBDF1 PDIA2 LOC105371047 CHTF18 SNORA10 LOC105371045 PIGQ SSTR5-AS1 HBM FAHD1 NOXO1 DECR2 IGFALS STUB1 MRPL28 CCDC154 LOC105371038 NDUFB10 MIR3176 RHBDL1 CEMP1 SNORA78 FAM234A GNG13 UBE2I MCRIP2 MIR4516 ERVK13-1 TPSAB1 FLJ42627 LMF1 PRSS27 TPSB2 LOC105371184 MIR6511B1 RAB26 CLCN7 MLST8 MIR3677 ABCA3 NTN3 HAGHL CRAMP1 C16orf59 E4F1 MIR3178 PRR35 TELO2 MIR6768 ABCA17P MSRB1 SLC9A3R2 TSR3 RPL23AP5 DNASE1L2 TBC1D24 MRPS34 LOC652276 TRAF7 SNHG19 METRN
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss NPW TSC2 NOXO1 SYNGR3 ZNF598 GFER TBL3 NTHL1 SLC9A3R2
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion RPS2 NPW SNORA10 MIR1225 NOXO1 PKD1 HS3ST6 LOC105371049 NDUFB10 SYNGR3 GFER SNHG9 SNORA64 RPL3L TBL3 MSRB1 SLC9A3R2 TSC2 MIR6511B1 RNF151 SNORA78 ZNF598 NTHL1 MIR4516
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion RPS2 NPW SNORA10 MIR1225 NOXO1 PKD1 LOC105371049 NDUFB10 SYNGR3 GFER SNHG9 SNORA64 TBL3 SLC9A3R2 TSC2 MIR6511B1 RNF151 SNORA78 ZNF598 NTHL1
nsv571190 Chr.16:2055054 - 2200730 on Build GRCh38 Loss SNORD60 CASKIN1 MIR1225 TSC2 MIR6511B1 RAB26 PKD1 TRAF7 MIR3180-5 LOC105371049 SNHG19 MIR4516

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