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See other HS3ST6 CNV Assays ›
Gene Symbol
HS3ST6
Assay Reference Genome
Location

Chr.16:1912511 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03942603_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 64711

Gene Name:

 heparan sulfate-glucosamine 3-sulfotransferase 6

Gene Aliases:

 3-OST-6, HS3ST5

Location:

 Chr.16:1911463-1921428 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HS3ST6 NM_001009606.3 NP_001009606.3
XM_011522608.2 XP_011520910.1
XM_011522609.2 XP_011520911.1
DY654407.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SNHG9 SNHG19 LOC105371045 FAM234A TELO2 PRSS29P RPUSD1 LINC00235 SPSB3 PDPK1 JMJD8 LOC105371049 WASIR2 IGFALS LOC106660606 WDR24 METRN SNORD60 PRSS27 LOC105371047 CHTF18 NPW TPSD1 E4F1 LOC729652 DNASE1L2 NTN3 HBA1 WDR90 PRR35 LOC107987233 SLC9A3R2 CACNA1H MSRB1 KCTD5 TPSG1 PDIA2 C16orf91 CLCN7 ZNF598 NOXO1 GFER MIR5587 FAHD1 SNORA64 C16orf59 MIR940 ATP6V0C PKD1 MIR3677 STUB1 NME3 LUC7L RAB26 MIR3177 MPG HS3ST6 CCDC154 MRPS34 PIGQ ABCA17P LOC105371184 LOC105371046 ERVK13-1 CCDC78 TPSAB1 PRR25 CRAMP1 LOC105371038 MIR6767 CASKIN1 MAPK8IP3 HBQ1 LOC101929280 SSTR5-AS1 GNG13 NDUFB10 PGP RAB11FIP3 WFIKKN1 RHBDL1 DECR2 NPRL3 TSC2 MIR3176 SYNGR3 C1QTNF8 FAM173A AXIN1 RHBDF1 HBM TMEM204 LMF1-AS1 HN1L LINC00254 MIR3178 METTL26 ECI1 NHLRC4 LOC107984876 TBC1D24 RPL23AP5 LOC100134368 ARHGDIG RGS11 SNORA10 HAGHL TSR3 FBXL16 MIR662 EME2 RHOT2 NTHL1 DDX11L10 NME4 MEIOB AMDHD2 IFT140 MIR3180-5 BRICD5 FLJ42627 MIR1225 RNF151 GNPTG MLST8 RAB40C UBE2I LOC652276 MCRIP2 SNORA78 MSLN SNRNP25 TRAF7 POLR3K MIR6768 NUBP2 HBZ HAGH LOC100287175 TBL3 MIR6859-4 MIR6511B1 NARFL RPL3L TMEM8A SOX8 BAIAP3 CEMP1 CAPN15 SSTR5 PTX4 TPSB2 LMF1 RNPS1 HBA2 CCNF UNKL RPS2 MRPL28 ABCA3 MIR4717 MIR4516
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion TSC2 SNORA64 NPW MIR1225 SNHG9 RNF151 PKD1 SYNGR3 SNORA78 SNORA10 LOC105371049 SLC9A3R2 MSRB1 HS3ST6 RPS2 NDUFB10 TBL3 NTHL1 MIR6511B1 ZNF598 MIR4516 RPL3L NOXO1 GFER
nsv833120 Chr.16:1893102 - 1980660 on Build GRCh38 Loss SNORA64 MSRB1 SNHG9 RNF151 HS3ST6 RPS2 NDUFB10 TBL3 SNORA78 RPL3L SNORA10 NOXO1
nsv519366 Chr.16:1851210 - 1961125 on Build GRCh38 Loss MSRB1 HS3ST6 NDUFB10 LINC00254 RPL3L MEIOB

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Function(s) Process(es)


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