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See other CRAMP1 CNV Assays ›
Gene Symbol
CRAMP1
Assay Reference Genome
Location

Chr.16:1618984 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03944552_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57585

Gene Name:

 cramped chromatin regulator homolog 1

Gene Aliases:

 CRAMP1L, HN1L, TCE4

Location:

 Chr.16:1614640-1677908 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CRAMP1 NM_020825.3 NP_065876.3
BE048705.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss EME2 MAPK8IP3 MIR3177 NUBP2 SPSB3 CRAMP1 NME3 IGFALS LOC105371046 MRPS34 HN1L HAGH IFT140
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SYNGR3 CCDC78 LOC105371047 FAM234A SNHG19 MRPL28 SPSB3 LOC105371038 PRSS29P CACNA1H BAIAP3 SOX8 RNPS1 ERVK13-1 MRPS34 LOC105371049 HN1L RAB11FIP3 NPW LOC100134368 PKD1 C16orf59 TSC2 CHTF18 PIGQ TPSD1 MIR3677 HBZ PRR25 DNASE1L2 ECI1 GNG13 CRAMP1 HS3ST6 FLJ42627 SNRNP25 WDR90 TPSB2 TMEM204 TBC1D24 FAHD1 HAGH TMEM8A METTL26 WASIR2 EME2 KCTD5 POLR3K PTX4 MIR6768 LOC100287175 E4F1 SNORA64 MEIOB AMDHD2 RAB26 TPSG1 MIR662 DECR2 NTHL1 MIR3178 MIR6767 LOC105371184 TPSAB1 WFIKKN1 HBQ1 NME3 WDR24 JMJD8 RHBDF1 MSRB1 MIR6511B1 C1QTNF8 SNORA10 MIR940 MIR3176 HBM FAM173A CCNF RPL3L MAPK8IP3 MIR3177 SSTR5 RHBDL1 CLCN7 STUB1 ATP6V0C RPUSD1 CEMP1 MIR1225 LOC106660606 RPS2 DDX11L10 SSTR5-AS1 LUC7L TRAF7 HBA1 PGP NOXO1 ABCA17P NME4 PDIA2 ABCA3 LOC729652 PRR35 SNHG9 AXIN1 NUBP2 GNPTG LINC00254 HAGHL ARHGDIG GFER CCDC154 METRN RGS11 LINC00235 HBA2 CAPN15 RAB40C LOC101929280 TBL3 SNORA78 MIR4717 MIR4516 MIR5587 PDPK1 LOC105371045 NTN3 TSR3 SLC9A3R2 FBXL16 TELO2 NARFL MSLN MCRIP2 RNF151 NHLRC4 RHOT2 LOC105371046 UBE2I ZNF598 PRSS27 MLST8 IFT140 SNORD60 LOC652276 RPL23AP5 MIR3180-5 NPRL3 BRICD5 NDUFB10 LOC107987233 MIR6859-4 LOC107984876 MPG LMF1-AS1 IGFALS C16orf91 CASKIN1 UNKL LMF1
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss EME2 MAPK8IP3 MIR3177 NUBP2 LOC105371047 SPSB3 TELO2 CRAMP1 NME3 IGFALS LOC105371046 MRPS34 TMEM204 HN1L FAHD1 HAGH IFT140 MEIOB
nsv827497 Chr.16:1618540 - 1619568 on Build GRCh38 Gain CRAMP1
dgv4855n54 Chr.16:1577507 - 1694025 on Build GRCh38 Loss LOC105371046 HN1L CRAMP1 IFT140
nsv833118 Chr.16:1550716 - 1711581 on Build GRCh38 Loss MAPK8IP3 LOC105371046 TMEM204 HN1L CRAMP1 IFT140
nsv827496 Chr.16:1589777 - 1638333 on Build GRCh38 Gain LOC105371046 CRAMP1 IFT140

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)


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