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See other CRAMP1 CNV Assays ›
Gene Symbol
CRAMP1
Assay Reference Genome
Location

Chr.16:1618984 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03944552_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57585

Gene Name:

 cramped chromatin regulator homolog 1

Gene Aliases:

 CRAMP1L, HN1L, TCE4

Location:

 Chr.16:1614640-1677908 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CRAMP1 NM_020825.3 NP_065876.3
BE048705.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss MAPK8IP3 MIR3177 HN1L LOC105371046 IGFALS NME3 EME2 MRPS34 CRAMP1 IFT140 NUBP2 SPSB3 HAGH
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication AMDHD2 ARHGDIG FLJ42627 HN1L ABCA17P WFIKKN1 ERVK13-1 MIR1225 POLR3K TRAF7 CAPN15 ATP6V0C JMJD8 MSLN SSTR5 METTL26 FAM173A LOC101929280 TBL3 RAB26 LOC100287175 METRN C16orf91 PIGQ CACNA1H HBQ1 NHLRC4 MIR6859-4 LMF1-AS1 FAHD1 CLCN7 MIR6767 WDR90 GFER MLST8 DNASE1L2 LOC652276 RHOT2 UNKL SNHG9 LOC105371045 MIR3180-5 MIR5587 MIR940 TPSB2 CASKIN1 MIR6511B1 MIR3178 MIR3176 RHBDL1 TELO2 AXIN1 SNORA64 STUB1 TPSG1 HAGHL ECI1 PTX4 SSTR5-AS1 ABCA3 NME4 SNORD60 NARFL HBM TSR3 PGP TSC2 MIR4516 LOC100134368 WDR24 SNRNP25 CRAMP1 LOC106660606 GNPTG RNPS1 MRPL28 SLC9A3R2 NUBP2 SPSB3 HAGH RAB40C LINC00254 CHTF18 NPRL3 NTHL1 UBE2I RPL3L CEMP1 HS3ST6 BRICD5 PRSS29P CCDC78 RAB11FIP3 PRR35 FAM234A TPSD1 NOXO1 LOC105371184 EME2 C1QTNF8 SYNGR3 MCRIP2 IFT140 WASIR2 FBXL16 GNG13 TMEM204 NDUFB10 HBZ LOC107987233 LOC105371046 TPSAB1 IGFALS TBC1D24 DECR2 LOC107984876 RPUSD1 MEIOB MIR662 MPG RGS11 LOC729652 RPL23AP5 RPS2 LOC105371038 RHBDF1 LINC00235 LOC105371047 NPW CCDC154 NME3 PDPK1 ZNF598 DDX11L10 CCNF PKD1 SNHG19 MRPS34 KCTD5 PRR25 MIR4717 SNORA10 PRSS27 LOC105371049 MIR3677 MAPK8IP3 MIR3177 SOX8 SNORA78 PDIA2 BAIAP3 NTN3 MSRB1 E4F1 HBA2 MIR6768 C16orf59 LMF1 TMEM8A LUC7L HBA1 RNF151
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss MAPK8IP3 MIR3177 HN1L LOC105371046 IGFALS LOC105371047 NME3 TELO2 EME2 MRPS34 CRAMP1 FAHD1 MEIOB IFT140 TMEM204 NUBP2 SPSB3 HAGH
nsv827497 Chr.16:1618540 - 1619568 on Build GRCh38 Gain CRAMP1
dgv4855n54 Chr.16:1577507 - 1694025 on Build GRCh38 Loss HN1L CRAMP1 IFT140 LOC105371046
nsv428317 Chr.16:1550716 - 1711581 on Build GRCh38 Gain MAPK8IP3 HN1L CRAMP1 IFT140 LOC105371046 TMEM204
nsv827496 Chr.16:1589777 - 1638333 on Build GRCh38 Gain CRAMP1 IFT140 LOC105371046

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)


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