accessibility menu, dialog, popup

UserName
Viewing profile as user:

Please enter the information below and press OK to send your cart to Core Services for purchase.

    

System Message

OKCancel
LOADING ...
See other AXIN1 CNV Assays ›
Gene Symbol
AXIN1
Assay Reference Genome
Location

Chr.16:292748 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03945241_cn
Size
Availability Made To Order
Catalog # 4400291
Price
Your Price
Online offer:
Check your price ›

Assay Details

Target Gene Details

Entrez Gene ID:

 8312

Gene Name:

 axin 1

Gene Aliases:

 AXIN, PPP1R49

Location:

 Chr.16:287440-355226 on Build GRCh38

Assay Gene Location:

 Within Intron 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AXIN1 NM_003502.3 NP_003493.1
NM_181050.2 NP_851393.1
NR_134879.1
XM_011522682.2 XP_011520984.1
XM_011522683.2 XP_011520985.1
XM_011522684.2 XP_011520986.1
XM_011522686.1 XP_011520988.1
XM_017023743.1 XP_016879232.1
XM_017023744.1 XP_016879233.1
XM_017023745.1 XP_016879234.1
XM_017023746.1 XP_016879235.1
AB208876.1 7 2223 BAD92113.1
AF009674.1 AAC51624.1
BC017447.1 AAH17447.1
BC044648.1 AAH44648.1
KF615847.1
KF615848.1
KF615849.1
KF615850.1
KF615851.1
KF615852.1
KF615853.1
KF615854.1
KU178413.1
KU178414.1
KU178415.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SOX8 CHTF18 UNKL RHOT2 LINC00235 MIR4516 MIR6511B1 BRICD5 MEIOB EME2 MIR662 RPL23AP5 CACNA1H METRN UBE2I POLR3K LOC729652 DECR2 LOC105371045 RPL3L LOC105371038 GNG13 FAHD1 PRR35 ARHGDIG PDPK1 KCTD5 CCDC154 HBM TRAF7 IFT140 WDR90 PGP TBC1D24 MIR6859-4 SYNGR3 RHBDF1 BAIAP3 PRR25 LOC101929280 RHBDL1 NTHL1 NARFL GFER NHLRC4 RNPS1 ATP6V0C TBL3 CRAMP1 MSLN HBA2 ECI1 DNASE1L2 SNORA64 MIR5587 RPS2 MAPK8IP3 TPSD1 ABCA17P SLC9A3R2 FAM234A MRPL28 CASKIN1 LOC105371184 NDUFB10 CLCN7 HBZ LOC105371049 SNORA10 MCRIP2 MIR3178 LOC107984876 WFIKKN1 ERVK13-1 LINC00254 MSRB1 MIR940 C16orf59 SPSB3 TSC2 TSR3 PRSS29P NME3 NPRL3 TPSB2 LOC106660606 LOC100134368 TMEM204 FBXL16 RGS11 AMDHD2 NME4 SNRNP25 PIGQ CCNF SSTR5 MIR3677 PTX4 GNPTG MPG E4F1 CEMP1 MIR6768 LOC105371046 SNORA78 NUBP2 RNF151 MRPS34 MIR3180-5 CAPN15 TPSG1 MIR3176 HN1L SNORD60 HS3ST6 LOC105371047 LMF1 HBQ1 HBA1 FAM173A SNHG9 MLST8 FLJ42627 ABCA3 PKD1 LUC7L WDR24 WASIR2 DDX11L10 IGFALS PRSS27 HAGH METTL26 MIR3177 CCDC78 LMF1-AS1 ZNF598 LOC100287175 SNHG19 RAB11FIP3 RAB26 MIR1225 STUB1 LOC107987233 NPW AXIN1 JMJD8 C16orf91 RPUSD1 TMEM8A NTN3 TPSAB1 RAB40C NOXO1 SSTR5-AS1 TELO2 PDIA2 C1QTNF8 LOC652276 MIR4717 HAGHL MIR6767
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain NME4 MRPL28 ARHGDIG DECR2 PDIA2 AXIN1 LOC100134368 RPL23AP5 TMEM8A FAM234A RGS11 RAB11FIP3
nsv952896 Chr.16:273501 - 321500 on Build GRCh38 Deletion ARHGDIG PDIA2 AXIN1 RGS11
esv3637564 Chr.16:287941 - 370218 on Build GRCh38 Gain MRPL28 AXIN1
nsv570951 Chr.16:279671 - 322597 on Build GRCh38 Loss ARHGDIG PDIA2 AXIN1
nsv827477 Chr.16:262247 - 297639 on Build GRCh38 Gain ARHGDIG PDIA2 AXIN1 FAM234A RGS11
nsv570947 Chr.16:272935 - 297326 on Build GRCh38 Loss ARHGDIG PDIA2 AXIN1 RGS11
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss NME4 MRPL28 ARHGDIG DECR2 PDIA2 AXIN1 LOC100134368 RPL23AP5 TMEM8A FAM234A RGS11 RAB11FIP3

Back To Top

More Information


Additional Information:

For this assay, SNP(s) [rs77405410] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


Back To Top

Related Products