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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2046581 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03946073_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 NP_001305122.1
NM_001318194.1 NP_001305123.1
NM_002528.6 NP_002519.1
XM_017023253.1 XP_016878742.1
AB001575.1 BAA19413.1
BC000391.2 AAH00391.2
BC003014.1 AAH03014.1
BE900738.1
BG468617.1
HY057336.1
HY094895.1
U79718.1 AAB41534.1
U81285.1 AAC51136.1
Y09687.1 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LOC101929280 HN1L SNHG9 MPG PIGQ MRPL28 CHTF18 NTHL1 MEIOB CCDC78 LOC105371046 AMDHD2 MCRIP2 GFER RPL3L AXIN1 MSLN MLST8 TSR3 RNPS1 UBE2I MIR6767 EME2 HBZ PKD1 CAPN15 CCDC154 WASIR2 LOC105371047 WDR24 RPS2 MSRB1 ARHGDIG NDUFB10 JMJD8 DNASE1L2 TPSG1 IGFALS LOC105371184 NPW LOC100134368 POLR3K MIR3176 TPSAB1 TSC2 TMEM204 GNPTG MIR5587 DECR2 PDIA2 SSTR5 SNRNP25 RAB26 RHOT2 HBQ1 C16orf59 WFIKKN1 PDPK1 LINC00254 HS3ST6 SPSB3 RAB11FIP3 ZNF598 MIR3178 C16orf91 LOC105371038 CASKIN1 PRSS29P RHBDL1 FBXL16 MIR3177 FAHD1 LOC105371045 SNORA10 NUBP2 MAPK8IP3 SNORA78 LUC7L ATP6V0C HAGH NHLRC4 MIR3677 SYNGR3 LOC106660606 PGP GNG13 MIR4516 TPSD1 CACNA1H SOX8 CLCN7 STUB1 WDR90 RAB40C NTN3 RPUSD1 TELO2 TRAF7 LINC00235 MIR6859-4 ABCA3 KCTD5 CEMP1 BAIAP3 CRAMP1 NARFL PTX4 LMF1-AS1 HBM MIR6768 IFT140 TBC1D24 UNKL MIR3180-5 RHBDF1 HAGHL FAM173A MIR4717 SNORD60 PRSS27 MIR1225 SSTR5-AS1 TBL3 MIR6511B1 E4F1 ERVK13-1 RNF151 BRICD5 CCNF LOC100287175 PRR25 NPRL3 TMEM8A METTL26 NOXO1 NME4 SLC9A3R2 C1QTNF8 MRPS34 DDX11L10 FLJ42627 LOC652276 MIR662 SNHG19 LOC729652 LOC105371049 NME3 LMF1 FAM234A MIR940 SNORA64 METRN RPL23AP5 RGS11 HBA1 TPSB2 ABCA17P HBA2 LOC107987233 LOC107984876 ECI1 PRR35
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss TBL3 ZNF598 GFER SYNGR3 NPW NOXO1 NTHL1 SLC9A3R2 TSC2
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion TBL3 MIR6511B1 ZNF598 PKD1 SNHG9 SYNGR3 NPW RNF151 NTHL1 LOC105371049 TSC2 RPS2 MSRB1 MIR4516 SNORA64 GFER RPL3L NDUFB10 NOXO1 SNORA10 SNORA78 SLC9A3R2 HS3ST6 MIR1225
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion TBL3 MIR6511B1 ZNF598 PKD1 SNHG9 SYNGR3 NPW RNF151 NTHL1 LOC105371049 TSC2 RPS2 SNORA64 GFER NDUFB10 NOXO1 SNORA10 SNORA78 SLC9A3R2 MIR1225

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