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See other TCF25 CNV Assays ›
Gene Symbol
TCF25
Assay Reference Genome
Location

Chr.16:89878560 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03946824_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 22980

Gene Name:

 transcription factor 25

Gene Aliases:

 FKSG26, Hulp1, NULP1, PRO2620, hKIAA1049

Location:

 Chr.16:89873583-89911384 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TCF25 NM_014972.2 NP_055787.1
XM_005256297.2 XP_005256354.1
XM_005256298.2 XP_005256355.1
XM_005256299.2 XP_005256356.1
XM_011522956.2 XP_011521258.1
XM_011522957.2 XP_011521259.1
XM_011522958.2 XP_011521260.1
XM_011522959.2 XP_011521261.1
XM_011522960.2 XP_011521262.1
XM_011522961.2 2 370 XP_011521263.1
XM_017023047.1 XP_016878536.1
XM_017023048.1 XP_016878537.1
XM_017023049.1 XP_016878538.1
XM_017023050.1 XP_016878539.1
XM_017023051.1 XP_016878540.1
XM_017023052.1 XP_016878541.1
XM_017023053.1 2 808 XP_016878542.1
XM_017023054.1 2 370 XP_016878543.1
XM_017023055.1 2 370 XP_016878544.1
XM_017023056.1 2 377 XP_016878545.1
XM_017023057.1 2 808 XP_016878546.1
XM_017023058.1 2 808 XP_016878547.1
AF322111.1 AAG50276.1
AK024679.1 BAB14959.1
AK301053.1
BC000959.1 AAH00959.1
BC009349.2 AAH09349.1
BC011884.2 AAH11884.1
BI913551.1
DQ321703.1 ABC55265.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv573744 Chr.16:89738447 - 89915950 on Build GRCh38 Loss SPIRE2 LOC107984817 LOC105371419 ZNF276 FANCA TCF25
esv2758671 Chr.16:89804324 - 89901541 on Build GRCh38 Loss SPIRE2 LOC107984817 LOC105371419 FANCA TCF25
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss VPS9D1 LOC107984817 SPATA2L ZNF276 CDK10 GAS8 CENPBD1 FANCA TUBB3 TCF25 DPEP1 VPS9D1-AS1 MC1R SPIRE2 LOC105371419 DBNDD1 SPATA33 DEF8 GAS8-AS1 CHMP1A AFG3L1P
nsv573810 Chr.16:89857498 - 90037251 on Build GRCh38 Loss MC1R SPIRE2 DBNDD1 GAS8 DEF8 GAS8-AS1 CENPBD1 TUBB3 TCF25 AFG3L1P
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss VPS9D1 RPL13 LOC107984817 CPNE7 ZNF276 LOC105371414 CDK10 GAS8 CENPBD1 FANCA FAM157C TUBB3 PRDM7 SPIRE2 URAHP DBNDD1 GAS8-AS1 SPG7 LOC101927817 LOC100287036 ZNF778 CHMP1A AFG3L1P SPATA2L ANKRD11 TUBB8P7 TCF25 DPEP1 VPS9D1-AS1 MC1R LOC105371419 SPATA33 DEF8 SNORD68
nsv573799 Chr.16:89852186 - 90022379 on Build GRCh38 Gain MC1R SPIRE2 LOC105371419 DBNDD1 GAS8 DEF8 CENPBD1 TUBB3 TCF25 AFG3L1P
nsv9479 Chr.16:89878586 - 89880246 on Build GRCh38 Gain TCF25
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss VPS9D1 CDT1 TRAPPC2L CPNE7 ZNF276 SNAI3 LOC105371414 LOC100129697 SPIRE2 URAHP GAS8-AS1 LOC100287036 CHMP1A AFG3L1P SPATA2L ANKRD11 LOC107987238 APRT TCF25 DPEP1 VPS9D1-AS1 MC1R LOC100289580 LOC105371419 IL17C SPATA33 DEF8 CBFA2T3 SNORD68 LOC105371409 RPL13 LOC107984817 MVD CDK10 GAS8 CENPBD1 FANCA FAM157C TUBB3 SNAI3-AS1 PRDM7 SLC22A31 DBNDD1 PIEZO1 CTU2 LOC339059 SPG7 LOC101927817 ZNF778 MIR4722 PABPN1L GALNS TUBB8P7 LINC00304 LOC400558 CYBA LOC101927793 RNF166 ACSF3 CDH15

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