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See other CRAMP1 CNV Assays ›
Gene Symbol
CRAMP1
Assay Reference Genome
Location

Chr.16:1635440 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03947870_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57585

Gene Name:

 cramped chromatin regulator homolog 1

Gene Aliases:

 CRAMP1L, HN1L, TCE4

Location:

 Chr.16:1614640-1677908 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CRAMP1 NM_020825.3 NP_065876.3
AB037847.2 BAA92664.2
BC137172.1
BC137173.1
BC152477.1
BE048705.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss NME3 IFT140 MRPS34 CRAMP1 HN1L SPSB3 LOC105371046 EME2 MIR3177 HAGH IGFALS MAPK8IP3 NUBP2
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication FBXL16 TELO2 LOC105371047 IFT140 MRPS34 HN1L FAM234A PRSS27 LMF1-AS1 MIR662 SYNGR3 PRR25 NPW HS3ST6 NOXO1 SOX8 ATP6V0C C1QTNF8 PGP MRPL28 DNASE1L2 SNRNP25 MIR1225 LOC652276 TBL3 NUBP2 WASIR2 PDIA2 LOC101929280 RAB11FIP3 MPG LUC7L LINC00235 STUB1 CCDC154 JMJD8 KCTD5 MSLN PIGQ LOC107987233 HBQ1 HBZ MIR3178 SNORA10 MIR3180-5 LOC105371184 HBM RPL3L RPL23AP5 AMDHD2 ZNF598 HBA1 CACNA1H SNORD60 RNPS1 EME2 MSRB1 WDR24 POLR3K RAB26 IGFALS WDR90 MIR6511B1 LOC107984876 ERVK13-1 MIR5587 LOC106660606 MIR940 TMEM204 CRAMP1 CAPN15 LOC100134368 LOC105371046 METRN WFIKKN1 ABCA17P NHLRC4 MLST8 MIR3176 PTX4 TRAF7 CCNF LOC105371049 SSTR5-AS1 CEMP1 GFER SNHG9 SNORA64 MIR4516 PKD1 NME3 MIR3677 SPSB3 SNHG19 LOC100287175 HBA2 PRR35 ABCA3 MIR4717 TMEM8A HAGH FLJ42627 UBE2I ECI1 AXIN1 MAPK8IP3 NTHL1 GNG13 BAIAP3 TPSD1 CCDC78 RHBDL1 LINC00254 SLC9A3R2 NTN3 NDUFB10 CLCN7 RPUSD1 HAGHL NME4 MIR3177 LOC105371045 NPRL3 SSTR5 LOC105371038 MCRIP2 ARHGDIG FAM173A TPSG1 MIR6767 C16orf59 C16orf91 RGS11 TSR3 METTL26 NARFL TPSAB1 SNORA78 UNKL DECR2 RPS2 PDPK1 TSC2 PRSS29P FAHD1 RAB40C RNF151 RHOT2 BRICD5 GNPTG MEIOB MIR6768 RHBDF1 CASKIN1 LOC729652 E4F1 LMF1 TPSB2 CHTF18 TBC1D24 MIR6859-4 DDX11L10
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss TELO2 TMEM204 NME3 LOC105371047 IFT140 MRPS34 CRAMP1 HN1L SPSB3 MEIOB LOC105371046 EME2 MIR3177 HAGH IGFALS FAHD1 MAPK8IP3 NUBP2
dgv4855n54 Chr.16:1577507 - 1694025 on Build GRCh38 Loss IFT140 CRAMP1 HN1L LOC105371046
nsv428317 Chr.16:1550716 - 1711581 on Build GRCh38 Gain TMEM204 IFT140 CRAMP1 HN1L MAPK8IP3 LOC105371046
nsv827496 Chr.16:1589777 - 1638333 on Build GRCh38 Gain IFT140 CRAMP1 LOC105371046

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)


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