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See other SEC14L5 CNV Assays ›
Gene Symbol
SEC14L5
Assay Reference Genome
Location

Chr.16:4975918 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03949044_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9717

Gene Name:

 SEC14 like lipid binding 5

Gene Aliases:

 PRELID4B

Location:

 Chr.16:4958317-5019155 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SEC14L5 NM_014692.1 NP_055507.1
AB007880.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv25186 Chr.16:4858500 - 5142800 on Build GRCh38 Gain NAGPA-AS1 SEC14L5 ALG1 NAGPA C16orf89 PPL UBN1 EEF2KMT
esv3637713 Chr.16:4957958 - 5307305 on Build GRCh38 Gain NAGPA-AS1 RBFOX1 SEC14L5 ALG1 NAGPA C16orf89 EEF2KMT
esv3637714 Chr.16:4958035 - 5079276 on Build GRCh38 Gain NAGPA-AS1 SEC14L5 ALG1 NAGPA C16orf89
esv2761893 Chr.16:4941276 - 4995458 on Build GRCh38 Loss SEC14L5
esv2422516 Chr.16:4775920 - 5160979 on Build GRCh38 Deletion SEPT12 NAGPA-AS1 SEC14L5 ALG1 NAGPA GLYR1 ROGDI C16orf89 PPL UBN1 SMIM22 EEF2KMT
esv3892763 Chr.16:4971982 - 4977763 on Build GRCh38 Loss SEC14L5
nsv1046986 Chr.16:4049000 - 5555721 on Build GRCh38 Gain CORO7 SEC14L5 GLYR1 MIR6769A MGRN1 UBALD1 EEF2KMT SRL GLIS2 RBFOX1 ALG1 C16orf89 HMOX2 ZNF500 ANKS3 C16orf96 NMRAL1 PPL UBN1 SMIM22 LINC01569 SEPT12 NAGPA C16orf71 LOC105371063 ADCY9 VASN NAGPA-AS1 PAM16 GLIS2-AS1 ROGDI CORO7-PAM16 TFAP4 DNAJA3 NUDT16L1 CDIP1
esv2760069 Chr.16:4922849 - 5374828 on Build GRCh38 Gain+Loss NAGPA-AS1 RBFOX1 SEC14L5 ALG1 NAGPA C16orf89 PPL EEF2KMT
nsv528586 Chr.16:4951303 - 5021669 on Build GRCh38 Gain SEC14L5
nsv571303 Chr.16:4960912 - 5284683 on Build GRCh38 Loss NAGPA-AS1 RBFOX1 SEC14L5 ALG1 NAGPA C16orf89 EEF2KMT
nsv1042612 Chr.16:4965694 - 5150514 on Build GRCh38 Loss NAGPA-AS1 SEC14L5 ALG1 NAGPA C16orf89 EEF2KMT
esv3892762 Chr.16:4967386 - 5060625 on Build GRCh38 Gain NAGPA-AS1 SEC14L5 NAGPA C16orf89

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More Information


Additional Information:

For this assay, SNP(s) [rs73527335] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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