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See other SLC9A3R2 CNV Assays ›
Gene Symbol
SLC9A3R2
Assay Reference Genome
Location

Chr.16:2038318 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03949076_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9351

Gene Name:

 SLC9A3 regulator 2

Gene Aliases:

 E3KARP, NHE3RF2, NHERF-2, NHERF2, OCTS2, SIP-1, SIP1, TKA-1

Location:

 Chr.16:2026868-2039026 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC9A3R2 NM_001130012.2 7 1486 NP_001123484.1
NM_001252073.1 6 1103 NP_001239002.1
NM_001252075.1 6 1097 NP_001239004.1
NM_001252076.1 6 1070 NP_001239005.1
NM_004785.5 7 1453 NP_004776.3
XM_005255702.4 6 2166 XP_005255759.1
XM_006720981.1 6 2963 XP_006721044.1
XM_017023894.1 6 2056 XP_016879383.1
XM_017023895.1 7 1341 XP_016879384.1
AF004900.1 7 1364 AAC63061.1
AF035771.1 AAC52090.1
BC014513.1 7 1459 AAH14513.2
BC069014.1 7 1455 AAH69014.1
BC106001.1 7 1462 AAI06002.1
U82108.1 7 1406 AAB53042.1
Z50150.1 7 1441 CAA90511.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication RPL23AP5 LOC105371045 RHBDL1 NME3 C16orf91 MPG ZNF598 LOC107987233 NPW MIR940 NME4 MIR4516 MIR1225 MIR6767 CCNF C1QTNF8 ECI1 NDUFB10 HS3ST6 SLC9A3R2 FLJ42627 MRPL28 MIR6768 HBZ MIR3176 HAGH HBA1 PGP LOC105371046 BAIAP3 FAM234A RPS2 TRAF7 RPUSD1 NOXO1 WASIR2 SNHG9 CEMP1 METRN FAM173A ARHGDIG MEIOB DNASE1L2 TSC2 SPSB3 FBXL16 NARFL PRR35 CRAMP1 SSTR5 WFIKKN1 MCRIP2 TPSD1 MIR4717 ATP6V0C GNPTG PDPK1 CAPN15 MIR5587 GNG13 RGS11 TPSB2 GFER MIR6511B1 LINC00254 TELO2 WDR90 MRPS34 BRICD5 LMF1-AS1 LOC100287175 TPSG1 TPSAB1 SNRNP25 FAHD1 LOC106660606 RAB40C AXIN1 SNHG19 SNORA64 WDR24 AMDHD2 SSTR5-AS1 NTHL1 CLCN7 LOC107984876 DECR2 NTN3 SYNGR3 PDIA2 MIR6859-4 HN1L HBM RNPS1 LINC00235 CHTF18 LOC101929280 IFT140 MIR3177 E4F1 ERVK13-1 CASKIN1 CCDC78 HBA2 SNORD60 TBC1D24 HAGHL RAB26 LUC7L TMEM8A CACNA1H JMJD8 CCDC154 LOC652276 RPL3L LOC105371047 SNORA10 MLST8 LOC729652 ABCA17P UBE2I METTL26 LOC105371049 PRSS29P NUBP2 SNORA78 C16orf59 HBQ1 PKD1 MIR3677 UNKL MIR3180-5 STUB1 TMEM204 PIGQ LOC105371038 MIR3178 RHOT2 PRSS27 EME2 MIR662 ABCA3 MSLN RHBDF1 TBL3 NHLRC4 LMF1 LOC105371184 RAB11FIP3 SOX8 MSRB1 NPRL3 MAPK8IP3 TSR3 PRR25 PTX4 DDX11L10 POLR3K KCTD5 LOC100134368 IGFALS RNF151
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss GFER NPW SLC9A3R2 NTHL1 TBL3 SYNGR3 ZNF598 TSC2 NOXO1
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion GFER HS3ST6 SNORA78 MIR6511B1 SLC9A3R2 NTHL1 TBL3 PKD1 RPL3L SYNGR3 ZNF598 RPS2 MSRB1 NOXO1 SNORA10 SNHG9 NPW MIR4516 MIR1225 SNORA64 TSC2 RNF151 LOC105371049 NDUFB10
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss GFER SNORA78 SLC9A3R2 TBL3 SYNGR3 ZNF598 RPS2 NOXO1 SNORA10 SNHG9 NPW SNORA64 RNF151 NDUFB10
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion GFER SNORA78 MIR6511B1 SLC9A3R2 NTHL1 TBL3 PKD1 SYNGR3 ZNF598 RPS2 NOXO1 SNORA10 SNHG9 NPW MIR1225 SNORA64 TSC2 RNF151 LOC105371049 NDUFB10
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss GFER SNHG9 NPW SNORA78 SLC9A3R2 TBL3 SYNGR3 ZNF598 RNF151 NOXO1
dgv779e212 Chr.16:2037225 - 2038968 on Build GRCh38 Loss SLC9A3R2

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