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See other TCF25 CNV Assays ›
Gene Symbol
TCF25
Assay Reference Genome
Location

Chr.16:89891189 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03950099_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 22980

Gene Name:

 transcription factor 25

Gene Aliases:

 FKSG26, Hulp1, NULP1, PRO2620, hKIAA1049

Location:

 Chr.16:89873583-89911384 on Build GRCh38

Assay Gene Location:

 Within Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TCF25 NM_014972.2 NP_055787.1
XM_005256297.2 XP_005256354.1
XM_005256298.2 XP_005256355.1
XM_005256299.2 XP_005256356.1
XM_011522956.2 XP_011521258.1
XM_011522957.2 XP_011521259.1
XM_011522958.2 XP_011521260.1
XM_011522959.2 XP_011521261.1
XM_011522960.2 XP_011521262.1
XM_011522961.2 XP_011521263.1
XM_017023047.1 XP_016878536.1
XM_017023048.1 XP_016878537.1
XM_017023049.1 XP_016878538.1
XM_017023050.1 XP_016878539.1
XM_017023051.1 XP_016878540.1
XM_017023052.1 XP_016878541.1
XM_017023053.1 XP_016878542.1
XM_017023054.1 XP_016878543.1
XM_017023055.1 XP_016878544.1
XM_017023056.1 XP_016878545.1
XM_017023057.1 XP_016878546.1
XM_017023058.1 XP_016878547.1
AB028972.1 BAA83001.1
AF130092.1 AAG35518.1
AF322111.1 AAG50276.1
BC000959.1 AAH00959.1
BC009349.2 AAH09349.1
BC011884.2 AAH11884.1
DQ321703.1 ABC55265.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv573744 Chr.16:89738447 - 89915950 on Build GRCh38 Loss FANCA ZNF276 LOC105371419 TCF25 SPIRE2 LOC107984817
esv2758671 Chr.16:89804324 - 89901541 on Build GRCh38 Loss FANCA LOC105371419 TCF25 SPIRE2 LOC107984817
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss VPS9D1-AS1 CENPBD1 FANCA DPEP1 MC1R SPATA33 ZNF276 AFG3L1P DBNDD1 TCF25 LOC107984817 GAS8-AS1 TUBB3 CDK10 GAS8 LOC105371419 CHMP1A SPIRE2 DEF8 VPS9D1 SPATA2L
nsv573810 Chr.16:89857498 - 90037251 on Build GRCh38 Loss GAS8-AS1 CENPBD1 MC1R TUBB3 GAS8 AFG3L1P DBNDD1 TCF25 SPIRE2 DEF8
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss CENPBD1 ZNF778 SPG7 MC1R LOC101927817 URAHP FAM157C DBNDD1 LOC107984817 TUBB8P7 GAS8-AS1 SNORD68 TUBB3 ANKRD11 CPNE7 CHMP1A DEF8 VPS9D1 VPS9D1-AS1 FANCA DPEP1 SPATA33 ZNF276 AFG3L1P TCF25 LOC105371414 RPL13 CDK10 GAS8 PRDM7 LOC105371419 LOC100287036 SPIRE2 SPATA2L
nsv573799 Chr.16:89852186 - 90022379 on Build GRCh38 Gain CENPBD1 MC1R TUBB3 GAS8 AFG3L1P LOC105371419 DBNDD1 TCF25 SPIRE2 DEF8
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LINC00304 SNAI3 FAM157C LOC105371409 LOC339059 LOC107984817 GAS8-AS1 CDT1 TUBB3 ANKRD11 CHMP1A CDH15 LOC101927793 SNAI3-AS1 DEF8 VPS9D1-AS1 CBFA2T3 RNF166 LOC105371414 MIR4722 GALNS CYBA GAS8 LOC105371419 LOC100289580 CTU2 CENPBD1 ZNF778 MVD SPG7 MC1R LOC101927817 URAHP PIEZO1 DBNDD1 TUBB8P7 SLC22A31 IL17C LOC400558 SNORD68 LOC107987238 CPNE7 VPS9D1 ACSF3 TRAPPC2L FANCA DPEP1 APRT SPATA33 ZNF276 PABPN1L AFG3L1P TCF25 LOC100129697 RPL13 CDK10 PRDM7 LOC100287036 SPIRE2 SPATA2L

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