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See other MAPK8IP3 CNV Assays ›
Gene Symbol
MAPK8IP3
Assay Reference Genome
Location

Chr.16:1734923 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03950154_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 23162

Gene Name:

 mitogen-activated protein kinase 8 interacting protein 3

Gene Aliases:

 JIP-3, JIP3, JSAP1, SYD2, syd

Location:

 Chr.16:1706183-1770317 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MAPK8IP3 NM_001040439.1 NP_001035529.1
NM_001318852.1 NP_001305781.1
NM_015133.4 NP_055948.2
XM_005255190.2 XP_005255247.1
XM_006720869.2 XP_006720932.1
XM_011522429.2 XP_011520731.1
XM_011522430.2 XP_011520732.1
XM_011522431.2 XP_011520733.1
XM_011522432.2 XP_011520734.1
XM_017023079.1 XP_016878568.1
XM_017023080.1 XP_016878569.1
XM_017023081.1 XP_016878570.1
AB028989.2
AB621811.1
AK024437.1 BAB15727.1
BC137123.1
BC137124.1
BC144486.1
BC150266.1
BY795428.2
CN405915.1
CR749696.1 CAH18476.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv457335 Chr.16:1729694 - 1789022 on Build GRCh38 Loss NME3 MAPK8IP3 MRPS34 SPSB3 MIR3177 NUBP2 EME2
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss NME3 LOC105371046 MRPS34 HN1L HAGH IFT140 EME2 MAPK8IP3 IGFALS SPSB3 MIR3177 CRAMP1 NUBP2
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication RAB40C MIR5587 NME4 SNORA10 CACNA1H WDR24 CCDC154 MSLN MIR3178 ARHGDIG RPL23AP5 SNORD60 CEMP1 HBQ1 MAPK8IP3 HAGHL WASIR2 TBL3 HS3ST6 RPUSD1 NTN3 PDPK1 CLCN7 LINC00235 NME3 POLR3K LOC107987233 MIR1225 SOX8 NARFL MIR4717 MIR6511B1 ABCA17P RNF151 DECR2 SSTR5-AS1 MIR6859-4 RHOT2 SNORA78 MPG GFER RHBDL1 PGP NOXO1 MIR4516 AXIN1 RAB26 HN1L LOC729652 LOC107984876 IFT140 TELO2 IGFALS WDR90 LOC105371047 C16orf59 MIR940 MLST8 LOC105371049 DNASE1L2 SNHG9 ATP6V0C TPSD1 ERVK13-1 RPL3L UNKL LOC105371046 CCNF E4F1 UBE2I JMJD8 GNG13 METTL26 CAPN15 LOC652276 MCRIP2 LOC100287175 CHTF18 LOC105371184 LOC100134368 SYNGR3 BRICD5 MIR662 HAGH CCDC78 TMEM8A DDX11L10 LOC105371038 TPSAB1 C16orf91 TMEM204 FAHD1 PRR25 LOC105371045 GNPTG AMDHD2 PIGQ TPSB2 MIR3177 HBA1 LINC00254 TSC2 SSTR5 HBM FBXL16 MRPS34 NDUFB10 SNRNP25 MIR3180-5 BAIAP3 MEIOB LMF1-AS1 ECI1 RPS2 SNHG19 PRSS29P CRAMP1 FAM173A MRPL28 NUBP2 ZNF598 NPRL3 TPSG1 MSRB1 LMF1 FAM234A RAB11FIP3 STUB1 SNORA64 HBA2 EME2 KCTD5 TSR3 MIR3176 RGS11 NPW SLC9A3R2 METRN LOC101929280 LUC7L PKD1 TRAF7 MIR6767 PTX4 ABCA3 PDIA2 PRSS27 NHLRC4 MIR3677 WFIKKN1 HBZ RHBDF1 CASKIN1 MIR6768 C1QTNF8 SPSB3 TBC1D24 FLJ42627 PRR35 LOC106660606 RNPS1 NTHL1
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss NME3 LOC105371046 MRPS34 HN1L HAGH IFT140 TMEM204 EME2 FAHD1 MEIOB MAPK8IP3 TELO2 IGFALS SPSB3 LOC105371047 MIR3177 CRAMP1 NUBP2
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion NME3 MAPK8IP3 IGFALS MRPS34 SPSB3 MIR3177 NUBP2 EME2
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss NME3 MRPS34 HN1L HAGH EME2 FAHD1 MEIOB MAPK8IP3 IGFALS SPSB3 MIR3177 CRAMP1 NUBP2
nsv1075908 Chr.16:1733298 - 1740499 on Build GRCh38 Duplication MAPK8IP3 MIR3177
esv27589 Chr.16:1734083 - 1740698 on Build GRCh38 Loss MAPK8IP3 MIR3177
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion NME3 FAHD1 MAPK8IP3 IGFALS MRPS34 SPSB3 HAGH MIR3177 NUBP2 EME2

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More Information


Additional Information:

For this assay, SNP(s) [rs111246013] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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