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See other CRAMP1 CNV Assays ›
Gene Symbol
CRAMP1
Assay Reference Genome
Location

Chr.16:1634387 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03950542_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57585

Gene Name:

 cramped chromatin regulator homolog 1

Gene Aliases:

 CRAMP1L, HN1L, TCE4

Location:

 Chr.16:1614640-1677908 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CRAMP1 NM_020825.3 NP_065876.3
AB037847.2 BAA92664.2
BC137172.1
BC137173.1
BC152477.1
BE048705.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss MAPK8IP3 LOC105371046 MRPS34 NME3 CRAMP1 EME2 HAGH SPSB3 NUBP2 MIR3177 IGFALS HN1L IFT140
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication AMDHD2 SNORA78 METTL26 RPL23AP5 PDPK1 WFIKKN1 AXIN1 PTX4 SYNGR3 MPG MIR662 TBL3 HAGHL LOC106660606 MRPL28 RHOT2 HBA2 HBZ LUC7L LMF1-AS1 SLC9A3R2 ARHGDIG TELO2 PRR25 RAB40C ABCA3 CAPN15 MRPS34 NARFL WDR24 CCDC78 LOC105371184 NME3 SNRNP25 CCDC154 PDIA2 RHBDL1 SNORD60 SPSB3 FBXL16 MIR4717 HBM CASKIN1 HN1L LOC652276 FAM173A GNPTG SNHG9 TMEM8A RPL3L RNF151 MCRIP2 NPRL3 CHTF18 JMJD8 BAIAP3 HS3ST6 FAM234A LINC00254 RNPS1 PRR35 IGFALS ABCA17P MLST8 C1QTNF8 TBC1D24 LMF1 RHBDF1 PRSS29P LOC107984876 TSC2 LOC105371047 FAHD1 LOC100287175 MEIOB LOC107987233 PIGQ TPSD1 NUBP2 TPSG1 LOC101929280 MIR3176 CLCN7 DNASE1L2 LOC105371045 ATP6V0C POLR3K STUB1 SNORA10 MSRB1 CRAMP1 KCTD5 METRN GNG13 PRSS27 MIR3178 EME2 RGS11 UBE2I TPSB2 MIR940 NTHL1 BRICD5 NOXO1 E4F1 TRAF7 IFT140 RAB26 CEMP1 LOC105371049 CACNA1H SOX8 WDR90 NPW C16orf59 MIR6768 HBA1 MIR3677 LOC105371038 SSTR5-AS1 LOC100134368 HBQ1 UNKL FLJ42627 MIR3177 GFER ECI1 RPUSD1 MSLN MAPK8IP3 SNHG19 TMEM204 TPSAB1 NHLRC4 MIR6859-4 C16orf91 SSTR5 MIR6511B1 LINC00235 CCNF MIR1225 SNORA64 PKD1 LOC729652 DDX11L10 RAB11FIP3 RPS2 LOC105371046 DECR2 PGP WASIR2 NDUFB10 ZNF598 ERVK13-1 HAGH MIR4516 MIR6767 MIR5587 NTN3 TSR3 NME4 MIR3180-5
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss TELO2 MAPK8IP3 TMEM204 LOC105371046 MRPS34 LOC105371047 NME3 CRAMP1 FAHD1 EME2 MEIOB HAGH SPSB3 NUBP2 MIR3177 IGFALS HN1L IFT140
dgv4855n54 Chr.16:1577507 - 1694025 on Build GRCh38 Loss LOC105371046 CRAMP1 HN1L IFT140
nsv833118 Chr.16:1550716 - 1711581 on Build GRCh38 Loss MAPK8IP3 TMEM204 LOC105371046 CRAMP1 HN1L IFT140
nsv827496 Chr.16:1589777 - 1638333 on Build GRCh38 Gain LOC105371046 CRAMP1 IFT140

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)


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