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See other TSC2 CNV Assays ›
Gene Symbol
TSC2
Assay Reference Genome
Location

Chr.16:2060289 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03951785_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 7249

Gene Name:

 tuberous sclerosis 2

Gene Aliases:

 LAM, PPP1R160, TSC4

Location:

 Chr.16:2047804-2088720 on Build GRCh38

Assay Gene Location:

 Within Intron 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSC2 NM_000548.4 NP_000539.2
NM_001077183.2 NP_001070651.1
NM_001114382.2 NP_001107854.1
NM_001318827.1 NP_001305756.1
NM_001318829.1 NP_001305758.1
NM_001318831.1 NP_001305760.1
NM_001318832.1 NP_001305761.1
XM_005255529.4 XP_005255586.2
XM_005255531.4 XP_005255588.2
XM_011522636.2 XP_011520938.1
XM_011522637.2 XP_011520939.1
XM_011522638.2 XP_011520940.2
XM_011522639.2 XP_011520941.1
XM_011522640.2 XP_011520942.1
XM_017023615.1 XP_016879104.1
XM_017023616.1 XP_016879105.1
XM_017023617.1 XP_016879106.1
XM_017023618.1 XP_016879107.1
AB210000.1
AK295672.1
AK295728.1
AK299343.1
BC150300.1
BX647816.1 CAI46010.1
KJ534954.1
KJ534955.1
KJ534956.1
KJ534957.1
KJ534958.1
KJ534982.1
KJ534983.1
KJ534984.1
KJ534985.1
KJ535011.1
KJ535022.1
KJ535038.1
KJ535039.1
KJ535051.1
KJ535091.1
KJ535094.1
X75621.1 CAA53287.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MIR6859-4 SSTR5 HN1L RAB40C SNHG9 PDIA2 PIGQ WDR90 TPSAB1 RPS2 NHLRC4 ECI1 WFIKKN1 FAM234A PRSS27 HS3ST6 GNPTG CRAMP1 RPL23AP5 KCTD5 TSR3 RHOT2 NDUFB10 FBXL16 SPSB3 NME3 MIR662 LINC00235 LOC105371184 RPUSD1 CCDC78 RNPS1 TPSG1 LMF1-AS1 CCDC154 CHTF18 TPSD1 LOC652276 LOC105371038 TBC1D24 LOC105371045 NARFL STUB1 HBM MIR6767 PRSS29P CLCN7 CEMP1 MCRIP2 NOXO1 CACNA1H MIR3177 PRR35 SNRNP25 DECR2 E4F1 FLJ42627 GFER HBA2 MIR4516 SNORA78 TMEM204 NME4 LOC100287175 ZNF598 MIR3178 WDR24 PKD1 MSLN MIR3180-5 MIR1225 RAB11FIP3 MIR5587 MRPL28 ERVK13-1 BRICD5 SSTR5-AS1 TBL3 MIR6511B1 FAM173A LOC105371046 POLR3K WASIR2 HBZ HBQ1 CASKIN1 HBA1 LOC107987233 RAB26 LINC00254 NUBP2 MRPS34 NPRL3 NPW FAHD1 LMF1 LOC105371047 METRN ABCA3 SNORA10 SOX8 PRR25 LOC100134368 PTX4 MLST8 TELO2 METTL26 PGP SNORA64 C16orf59 C16orf91 MSRB1 AMDHD2 ARHGDIG EME2 PDPK1 IGFALS MPG LOC107984876 TMEM8A CAPN15 MIR3176 SNHG19 RHBDF1 RNF151 MIR6768 NTHL1 HAGHL MIR3677 LUC7L UBE2I RPL3L JMJD8 NTN3 SLC9A3R2 BAIAP3 C1QTNF8 TPSB2 MAPK8IP3 RHBDL1 IFT140 ABCA17P LOC101929280 MIR940 HAGH SNORD60 DNASE1L2 LOC106660606 MIR4717 DDX11L10 UNKL MEIOB CCNF LOC105371049 SYNGR3 ATP6V0C GNG13 TRAF7 TSC2 RGS11 AXIN1 LOC729652
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss NTHL1 MIR6511B1 MIR3677 CASKIN1 NOXO1 SLC9A3R2 RAB26 NPW E4F1 ECI1 GFER ABCA3 MIR940 MLST8 MIR4516 SNORD60 DNASE1L2 LOC106660606 MIR4717 ZNF598 LOC105371049 PGP SYNGR3 PKD1 MIR3180-5 MIR1225 RNPS1 TRAF7 TSC2 SNHG19 BRICD5 TBL3
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion NTHL1 MIR6511B1 MIR4516 SNORA78 NDUFB10 ZNF598 RPL3L LOC105371049 SNORA64 MSRB1 SYNGR3 SNHG9 PKD1 NOXO1 SLC9A3R2 MIR1225 NPW RPS2 TSC2 GFER RNF151 SNORA10 HS3ST6 TBL3
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion NTHL1 MIR6511B1 SNORA78 NDUFB10 ZNF598 LOC105371049 SNORA64 SYNGR3 SNHG9 PKD1 NOXO1 SLC9A3R2 MIR1225 NPW RPS2 TSC2 GFER RNF151 SNORA10 TBL3
nsv457349 Chr.16:2055054 - 2200730 on Build GRCh38 Loss MIR6511B1 RAB26 MIR4516 MIR3180-5 MIR1225 SNORD60 TRAF7 TSC2 LOC105371049 SNHG19 CASKIN1 PKD1

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