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See other CRAMP1 CNV Assays ›
Gene Symbol
CRAMP1
Assay Reference Genome
Location

Chr.16:1629159 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03951883_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57585

Gene Name:

 cramped chromatin regulator homolog 1

Gene Aliases:

 CRAMP1L, HN1L, TCE4

Location:

 Chr.16:1614640-1677908 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CRAMP1 NM_020825.3 NP_065876.3
BC137172.1
BC137173.1
BE048705.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss MRPS34 NUBP2 SPSB3 MIR3177 HN1L EME2 NME3 IGFALS CRAMP1 HAGH LOC105371046 IFT140 MAPK8IP3
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication PKD1 MIR3178 SSTR5-AS1 EME2 HS3ST6 IGFALS AMDHD2 CHTF18 SYNGR3 E4F1 WDR90 MIR4717 TPSAB1 AXIN1 FLJ42627 METRN MIR3176 MSRB1 HBA1 LOC105371047 MRPS34 CCDC154 FBXL16 JMJD8 MCRIP2 LOC107984876 ECI1 CASKIN1 MSLN ATP6V0C TSC2 TRAF7 PRR35 LOC105371049 TELO2 NHLRC4 NUBP2 METTL26 LOC105371038 RHBDL1 RGS11 WASIR2 CRAMP1 TMEM204 LOC105371184 LMF1 PIGQ MIR3180-5 NPW CAPN15 PTX4 GNG13 RNF151 HBQ1 MAPK8IP3 CCDC78 PDIA2 LOC107987233 HBZ RAB40C PGP HBA2 GNPTG SNHG9 HAGH HAGHL DECR2 FAM173A DDX11L10 ABCA3 KCTD5 LOC101929280 CEMP1 SNORA78 SOX8 C1QTNF8 RPL23AP5 SPSB3 MIR6767 FAM234A DNASE1L2 UNKL PRSS27 LOC100287175 PDPK1 WFIKKN1 POLR3K LMF1-AS1 SNORA64 TBC1D24 UBE2I MRPL28 RPUSD1 MPG BAIAP3 LOC105371045 SNHG19 RHOT2 TPSG1 ZNF598 C16orf59 NTHL1 MEIOB MIR6768 GFER ABCA17P FAHD1 HN1L RHBDF1 STUB1 SNORA10 RAB11FIP3 LOC652276 LOC106660606 IFT140 MIR6859-4 RNPS1 MIR940 TSR3 NDUFB10 TPSB2 NPRL3 SNORD60 LOC729652 MIR3177 TMEM8A WDR24 TBL3 C16orf91 NARFL NTN3 MIR1225 LUC7L CCNF CACNA1H MIR3677 BRICD5 HBM ERVK13-1 MLST8 RPL3L SNRNP25 TPSD1 MIR4516 NME3 PRSS29P ARHGDIG RAB26 LOC105371046 NME4 SLC9A3R2 MIR662 LOC100134368 CLCN7 SSTR5 PRR25 LINC00254 MIR5587 MIR6511B1 NOXO1 RPS2 LINC00235
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss TELO2 MRPS34 NUBP2 SPSB3 MIR3177 FAHD1 HN1L EME2 NME3 IGFALS CRAMP1 HAGH LOC105371046 TMEM204 IFT140 MAPK8IP3 LOC105371047 MEIOB
dgv4855n54 Chr.16:1577507 - 1694025 on Build GRCh38 Loss IFT140 HN1L CRAMP1 LOC105371046
nsv833118 Chr.16:1550716 - 1711581 on Build GRCh38 Loss IFT140 HN1L CRAMP1 MAPK8IP3 LOC105371046 TMEM204
nsv827496 Chr.16:1589777 - 1638333 on Build GRCh38 Gain IFT140 CRAMP1 LOC105371046

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)


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