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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2042192 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03952686_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 NP_001305122.1
NM_001318194.1 NP_001305123.1
NM_002528.6 NP_002519.1
XM_017023253.1 XP_016878742.1
AB001575.1 BAA19413.1
BC000391.2 AAH00391.2
BC003014.1 AAH03014.1
BE900738.1
BG468617.1
U79718.1 AAB41534.1
U81285.1 AAC51136.1
Y09687.1 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TBC1D24 HS3ST6 METTL26 TPSD1 PDPK1 TBL3 WDR24 HBA1 SPSB3 NDUFB10 MSRB1 NTHL1 NPRL3 WASIR2 CRAMP1 DNASE1L2 SSTR5-AS1 LOC107984876 HAGH MSLN KCTD5 PRR35 MAPK8IP3 C16orf91 FLJ42627 RNPS1 TPSAB1 MIR3176 RGS11 SSTR5 MIR940 MIR3178 TPSB2 PTX4 RAB11FIP3 GNG13 NPW LOC107987233 CASKIN1 RHOT2 LOC652276 MIR3677 NME4 LOC100134368 PKD1 MIR662 SNRNP25 C16orf59 LINC00235 HAGHL ATP6V0C TRAF7 TPSG1 SNORA10 CCDC154 LOC729652 MCRIP2 AMDHD2 CHTF18 SLC9A3R2 IGFALS MRPL28 MIR4717 LOC101929280 MIR6859-4 BAIAP3 CAPN15 SNHG9 LMF1-AS1 SNORD60 PRR25 LOC105371045 DECR2 LINC00254 MIR3180-5 NARFL MIR1225 CACNA1H SYNGR3 RAB40C ERVK13-1 NHLRC4 HN1L TELO2 PGP RPUSD1 MIR6767 FAHD1 LUC7L LOC105371038 MIR3177 GFER HBZ UBE2I C1QTNF8 RPS2 SNORA64 NME3 AXIN1 ECI1 MIR5587 PIGQ UNKL PRSS29P MPG TSC2 SOX8 GNPTG EME2 LOC105371184 METRN NUBP2 MEIOB TMEM8A MLST8 HBM ABCA3 ABCA17P RAB26 FBXL16 POLR3K WDR90 PDIA2 LOC105371046 ARHGDIG E4F1 NOXO1 PRSS27 RPL23AP5 FAM173A DDX11L10 HBQ1 LOC106660606 WFIKKN1 MRPS34 MIR4516 MIR6511B1 STUB1 LMF1 BRICD5 IFT140 RHBDL1 TSR3 TMEM204 RNF151 JMJD8 CCNF SNORA78 LOC105371047 LOC105371049 CCDC78 NTN3 SNHG19 HBA2 MIR6768 CEMP1 ZNF598 RPL3L RHBDF1 FAM234A CLCN7 LOC100287175
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss SLC9A3R2 NOXO1 TSC2 NTHL1 TBL3 NPW ZNF598 GFER SYNGR3
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion SNORA64 HS3ST6 SNORA10 MIR1225 RNF151 TBL3 NPW SNORA78 LOC105371049 SYNGR3 SLC9A3R2 NOXO1 PKD1 TSC2 NDUFB10 MSRB1 NTHL1 SNHG9 ZNF598 RPL3L GFER MIR4516 MIR6511B1 RPS2
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion SNORA64 SNORA10 MIR1225 RNF151 TBL3 NPW SNORA78 LOC105371049 SYNGR3 SLC9A3R2 NOXO1 PKD1 TSC2 NDUFB10 NTHL1 SNHG9 ZNF598 GFER MIR6511B1 RPS2

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