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See other TCF25 CNV Assays ›
Gene Symbol
TCF25
Assay Reference Genome
Location

Chr.16:89895732 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03952949_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 22980

Gene Name:

 transcription factor 25

Gene Aliases:

 FKSG26, Hulp1, NULP1, PRO2620, hKIAA1049

Location:

 Chr.16:89873583-89911384 on Build GRCh38

Assay Gene Location:

 Within Intron 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TCF25 NM_014972.2 NP_055787.1
XM_005256297.2 XP_005256354.1
XM_005256298.2 XP_005256355.1
XM_005256299.2 XP_005256356.1
XM_011522956.2 XP_011521258.1
XM_011522957.2 XP_011521259.1
XM_011522958.2 XP_011521260.1
XM_011522959.2 XP_011521261.1
XM_011522960.2 XP_011521262.1
XM_011522961.2 XP_011521263.1
XM_017023047.1 XP_016878536.1
XM_017023048.1 XP_016878537.1
XM_017023049.1 XP_016878538.1
XM_017023050.1 XP_016878539.1
XM_017023051.1 XP_016878540.1
XM_017023052.1 XP_016878541.1
XM_017023053.1 XP_016878542.1
XM_017023054.1 XP_016878543.1
XM_017023055.1 XP_016878544.1
XM_017023056.1 XP_016878545.1
XM_017023057.1 XP_016878546.1
XM_017023058.1 XP_016878547.1
AB028972.1 BAA83001.1
AF130092.1 AAG35518.1
AF322111.1 AAG50276.1
BC000959.1 AAH00959.1
BC009349.2 AAH09349.1
BC011884.2 AAH11884.1
DQ321703.1 ABC55265.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv573744 Chr.16:89738447 - 89915950 on Build GRCh38 Loss LOC105371419 ZNF276 SPIRE2 TCF25 FANCA LOC107984817
esv2758671 Chr.16:89804324 - 89901541 on Build GRCh38 Loss LOC105371419 SPIRE2 TCF25 FANCA LOC107984817
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss LOC105371419 TUBB3 GAS8-AS1 SPATA33 SPIRE2 DPEP1 LOC107984817 VPS9D1 CENPBD1 AFG3L1P GAS8 ZNF276 CDK10 CHMP1A DBNDD1 TCF25 FANCA SPATA2L MC1R VPS9D1-AS1 DEF8
nsv573810 Chr.16:89857498 - 90037251 on Build GRCh38 Loss CENPBD1 AFG3L1P TUBB3 GAS8 GAS8-AS1 SPIRE2 DBNDD1 TCF25 MC1R DEF8
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss SPG7 TUBB3 ZNF778 SPATA33 SPIRE2 LOC100287036 DPEP1 VPS9D1 CPNE7 SNORD68 ANKRD11 ZNF276 CDK10 CHMP1A FANCA LOC105371414 SPATA2L VPS9D1-AS1 DEF8 LOC105371419 FAM157C GAS8-AS1 LOC107984817 CENPBD1 AFG3L1P LOC101927817 GAS8 RPL13 PRDM7 DBNDD1 TCF25 URAHP MC1R TUBB8P7
nsv573799 Chr.16:89852186 - 90022379 on Build GRCh38 Gain CENPBD1 AFG3L1P LOC105371419 TUBB3 GAS8 SPIRE2 DBNDD1 TCF25 MC1R DEF8
nsv1066499 Chr.16:89891957 - 90028891 on Build GRCh38 Loss CENPBD1 AFG3L1P TUBB3 GAS8 DBNDD1 TCF25 MC1R DEF8
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC107987238 SPG7 TUBB3 ZNF778 SPATA33 VPS9D1 MVD CDH15 CPNE7 SNORD68 VPS9D1-AS1 SNAI3-AS1 LOC339059 LOC105371419 CBFA2T3 LOC100289580 LOC100129697 GAS8-AS1 LOC107984817 CTU2 CENPBD1 APRT GALNS PIEZO1 LINC00304 PRDM7 TCF25 URAHP TUBB8P7 ACSF3 CDT1 SLC22A31 SPIRE2 LOC100287036 DPEP1 ANKRD11 ZNF276 CDK10 LOC105371409 CHMP1A PABPN1L FANCA LOC105371414 SPATA2L DEF8 SNAI3 FAM157C LOC101927793 IL17C AFG3L1P LOC101927817 RNF166 TRAPPC2L GAS8 RPL13 MIR4722 LOC400558 DBNDD1 MC1R CYBA

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